ROIs defined on CZI MIPs are rotated

[DrLachie]

The MIP image generated via ZEN has been rotated 90 degrees right. If users are using this image to define rois with the roi manager in fiji/imagej then the rois are incorrect when imported into lls-pipeline. We have two workarounds:

• Before defining ROIs, rotate the image 90 degrees left and draw ROIs on the rotated image
  OR
• Transform ROIs before importing into lls-pipeline. Attached FIJI macro does this (rename from txt to ijm - requires BIOP and IJPB plugins.
  fix_rois.txt

In future Zen may change rotation - it's changed before. Could add version check and apply fix or raise error to user.