diff --git a/Dockerfile b/Dockerfile index 736580ac..90f9474a 100644 --- a/Dockerfile +++ b/Dockerfile @@ -28,10 +28,10 @@ RUN conda config --quiet --add channels conda-forge \ # && python3 -m pip install -r "${HOME}/pip_install.txt" \ #&& mamba env update --name base --file "${ENVIRONMENT_FILE}" \ && mamba clean --quiet --all --force-pkgs-dirs --yes \ - && R -e 'devtools::install_github("babessell1/zFPKM", quiet=TRUE)' \ + && R -e "devtools::install_github('babessell1/zFPKM')" \ # Install jupyter extensions - && jupyter labextension -y install @jupyter-widgets/jupyterlab-manager \ - && jupyter labextension -y install escher \ + && jupyter labextension install @jupyter-widgets/jupyterlab-manager \ + && jupyter labextension install escher \ && jupyter trust "${JUPYTER_NOTEBOOK}" \ && rm -f "${ENVIRONMENT_FILE}" "${HOME}/pip_install.txt" "${HOME}/mamba_install.txt"