From 940460d998b3011dbb000dc08fa1b899d8dcda89 Mon Sep 17 00:00:00 2001
From: Josh Loecker <joshloecker@icloud.com>
Date: Wed, 31 Aug 2022 15:48:05 -0500
Subject: [PATCH] Fixed potential errors in github action building

---
 Dockerfile | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/Dockerfile b/Dockerfile
index 736580ac..90f9474a 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -28,10 +28,10 @@ RUN conda config --quiet --add channels conda-forge \
     # && python3 -m pip install -r "${HOME}/pip_install.txt" \
     #&& mamba env update --name base --file "${ENVIRONMENT_FILE}" \
     && mamba clean --quiet --all --force-pkgs-dirs --yes \
-    && R -e 'devtools::install_github("babessell1/zFPKM", quiet=TRUE)' \
+    && R -e "devtools::install_github('babessell1/zFPKM')" \
     # Install jupyter extensions
-    && jupyter labextension -y install @jupyter-widgets/jupyterlab-manager \
-    && jupyter labextension -y install escher \
+    && jupyter labextension install @jupyter-widgets/jupyterlab-manager \
+    && jupyter labextension install escher \
     && jupyter trust "${JUPYTER_NOTEBOOK}" \
     && rm -f "${ENVIRONMENT_FILE}" "${HOME}/pip_install.txt" "${HOME}/mamba_install.txt"