From 4473c9038b5353e8160fd4ad6ad4a7a5b09ce6d1 Mon Sep 17 00:00:00 2001 From: Robyn Thiessen-Bock Date: Tue, 16 May 2023 08:07:09 -0400 Subject: [PATCH] change version to 2.24.0 and new doc build --- README.md | 2 +- docs/_config.yml | 2 +- docs/docs/AccessPolicy.html | 2 +- docs/docs/AccessPolicyView.html | 2 +- docs/docs/AccessRule.html | 2 +- docs/docs/AccessRuleView.html | 2 +- docs/docs/AccountSelectView.html | 2 +- docs/docs/AnnotationFilter.html | 2 +- docs/docs/AnnotationView.html | 2 +- docs/docs/AnnotatorView.html | 2 +- docs/docs/AppConfig.html | 587 +++++++-- docs/docs/AppModel.html | 108 +- docs/docs/AppView.html | 2 +- docs/docs/AssetColor.html | 2 +- docs/docs/AssetColorPalette.html | 2 +- docs/docs/AssetColors.html | 2 +- docs/docs/BooleanFilter.html | 2 +- docs/docs/BooleanFilterView.html | 2 +- docs/docs/CatalogSearchView.html | 2 +- docs/docs/Cesium3DTileset.html | 4 +- docs/docs/CesiumGeohash.html | 4 +- docs/docs/CesiumGeohashes.html | 2 +- docs/docs/CesiumImagery.html | 4 +- docs/docs/CesiumTerrain.html | 4 +- docs/docs/CesiumVectorData.html | 4 +- docs/docs/CesiumWidgetView.html | 2 +- docs/docs/ChoiceFilter.html | 2 +- docs/docs/ChoiceFilterView.html | 2 +- docs/docs/CitationHeaderView.html | 2 +- docs/docs/CitationListView.html | 2 +- docs/docs/CitationModalView.html | 2 +- docs/docs/CitationModel.html | 2 +- docs/docs/CitationView.html | 2 +- docs/docs/Citations.html | 2 +- docs/docs/CollectionModel.html | 2 +- docs/docs/ColorPaletteView.html | 2 +- docs/docs/DataCatalogViewWithFilters.html | 2 +- docs/docs/DataItemView.html | 2 +- docs/docs/DataONEObject.html | 2 +- docs/docs/DataPackage.html | 2 +- docs/docs/DataPackageView.html | 2 +- docs/docs/DateFilter.html | 2 +- docs/docs/DateFilterView.html | 2 +- docs/docs/DraftsView.html | 2 +- docs/docs/EML211.html | 2 +- docs/docs/EML211EditorView.html | 2 +- docs/docs/EMLAnnotation.html | 2 +- docs/docs/EMLAnnotations.html | 2 +- docs/docs/EMLAttribute.html | 2 +- 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...models_maps_assets_Cesium3DTileset.js.html | 2 +- ...s_models_maps_assets_CesiumGeohash.js.html | 2 +- ...s_models_maps_assets_CesiumImagery.js.html | 2 +- ...s_models_maps_assets_CesiumTerrain.js.html | 2 +- ...odels_maps_assets_CesiumVectorData.js.html | 2 +- ...src_js_models_maps_assets_MapAsset.js.html | 4 +- ...js_models_metadata_ScienceMetadata.js.html | 2 +- ...c_js_models_metadata_eml211_EML211.js.html | 2 +- ...dels_metadata_eml211_EMLAnnotation.js.html | 2 +- ...odels_metadata_eml211_EMLAttribute.js.html | 2 +- ...odels_metadata_eml211_EMLDataTable.js.html | 2 +- ...s_models_metadata_eml211_EMLEntity.js.html | 2 +- ...els_metadata_eml211_EMLGeoCoverage.js.html | 2 +- ...etadata_eml211_EMLMeasurementScale.js.html | 2 +- ..._models_metadata_eml211_EMLMethods.js.html | 2 +- ...etadata_eml211_EMLNonNumericDomain.js.html | 2 +- ...s_metadata_eml211_EMLNumericDomain.js.html | 2 +- ...els_metadata_eml211_EMLOtherEntity.js.html | 2 +- ...js_models_metadata_eml211_EMLParty.js.html | 2 +- ...s_metadata_eml211_EMLTaxonCoverage.js.html | 514 ++++++++ ...etadata_eml211_EMLTemporalCoverage.js.html | 2 +- ..._js_models_metadata_eml211_EMLText.js.html | 2 +- ..._js_models_metadata_eml211_EMLUnit.js.html | 2 +- ..._js_models_metadata_eml220_EMLText.js.html | 2 +- ..._models_metadata_eml_EMLMethodStep.js.html | 2 +- ...ls_metadata_eml_EMLSpecializedText.js.html | 2 +- .../src_js_models_portals_PortalImage.js.html | 2 +- .../src_js_models_portals_PortalModel.js.html | 2 +- ..._models_portals_PortalSectionModel.js.html | 2 +- ...dels_portals_PortalVizSectionModel.js.html | 2 +- .../src_js_models_projects_Project.js.html | 2 +- ...c_js_models_queryFields_QueryField.js.html | 2 +- docs/docs/src_js_routers_router.js.html | 2 +- .../src_js_views_AccessPolicyView.js.html | 2 +- docs/docs/src_js_views_AccessRuleView.js.html | 2 +- docs/docs/src_js_views_AnnotationView.js.html | 2 +- docs/docs/src_js_views_AppView.js.html | 2 +- .../src_js_views_CitationHeaderView.js.html | 2 +- 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2 +- ..._portals_editor_PortEditorDataView.js.html | 2 +- ...portals_editor_PortEditorImageView.js.html | 2 +- ...portals_editor_PortEditorLogosView.js.html | 2 +- ...als_editor_PortEditorMdSectionView.js.html | 2 +- ...rtals_editor_PortEditorSectionView.js.html | 2 +- ...tals_editor_PortEditorSectionsView.js.html | 2 +- ...tals_editor_PortEditorSettingsView.js.html | 2 +- ...ws_portals_editor_PortalEditorView.js.html | 2 +- .../src_js_views_projects_ProjectView.js.html | 2 +- ...iews_queryBuilder_QueryBuilderView.js.html | 2 +- ...s_views_queryBuilder_QueryRuleView.js.html | 2 +- ...ews_searchSelect_AccountSelectView.js.html | 2 +- ..._searchSelect_AnnotationFilterView.js.html | 2 +- ..._views_searchSelect_NodeSelectView.js.html | 2 +- ...earchSelect_ObjectFormatSelectView.js.html | 2 +- ..._searchSelect_QueryFieldSelectView.js.html | 2 +- ..._searchSelect_SearchableSelectView.js.html | 13 +- ..._js_views_search_CatalogSearchView.js.html | 2 +- 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We [welcome contributions](http Cite this software as: -> Matthew B. Jones, Chris Jones, Lauren Walker, Robyn Thiessen-Bock, Ben Leinfelder, Peter Slaughter, Bryce Mecum, Rushiraj Nenuji, Hesham Elbashandy, Val Hendrix. 2022. MetacatUI: A client-side web interface for DataONE data repositories (version 2.23.0). Arctic Data Center. [doi:10.18739/A25M6282K](https://doi.org/10.18739/A25M6282K) +> Matthew B. Jones, Chris Jones, Lauren Walker, Robyn Thiessen-Bock, Ben Leinfelder, Peter Slaughter, Bryce Mecum, Rushiraj Nenuji, Hesham Elbashandy, Val Hendrix. 2022. MetacatUI: A client-side web interface for DataONE data repositories (version 2.24.0). Arctic Data Center. 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Type:
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+ + + + + + + + + + + + + + + + +

+ + + + + quickAddTaxa :Array.<AppConfig#quickAddTaxaList>|string +

+ + + + +
+ A list of taxa to show in the Taxa Quick Add section of the EML editor. +This can be used to expedite entry of taxa that are common in the +repository's domain. The quickAddTaxa is a list of objects, each +defining a separate dropdown interface. This way, common taxa can +be grouped together. +Alternative, provide a SID for a JSON data object that is stored in the +repository. The JSON must be in the same format as required for this +configuration option. +
+ + + +
Type:
+ + + + + + +
+ + + + +
Since:
+
  • 2.24.0
+ + + + + + + + + + + + + + + + + + + + + + + +
Source:
+
@@ -13438,6 +13529,22 @@
Type:
+
Example
+ + 
[
+  {
+    label: "Bats"
+    placeholder: "Select one or more bats",
+    taxa: [ ... ]
+  },
+  {
+    label: "Birds"
+    placeholder: "Select one or more birds",
+    taxa: [ ... ]
+  }
+]
+ + @@ -13509,7 +13616,7 @@
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+

Type Definitions

+ + + +

+ + + + + quickAddTaxaList +

+ + + + +
+ Configuration options for a drop down list of taxa. +
+ + + +
Type:
+
    +
  • + +object + + +
    • +
+ + + + + +
Properties:
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
NameTypeDescription
label + + +string + + + + The label for the dropdown menu
placeholder + + +string + + + + The placeholder text for the input field
taxa + + +Array.<EMLTaxonCoverage#taxonomicClassification> + + + + The list of taxa to show in the dropdown menu
+ + + + +
+ + + + +
Since:
+
  • 2.24.0
+ + + + + + + + + + + + + + + + + + + + + + + +
Source:
+
+ + + + + + + +
+ + + + + +
Example
+ + 
{
+ label: "Primates",
+ placeholder: "Select one or more primates",
+ taxa: [
+   {
+    commonName: "Bonobo",
+    taxonRankName: "Species",
+    taxonRankValue: "Pan paniscus",
+    taxonId: {
+       provider: "ncbi",
+       value: "9597"
+    }
+  },
+  {
+    commonName: "Chimpanzee",
+    ...
+  },
+  ...
+}
+ + + + + diff --git a/docs/docs/AppModel.html b/docs/docs/AppModel.html index 66717e14a..0b94bd8f9 100644 --- a/docs/docs/AppModel.html +++ b/docs/docs/AppModel.html @@ -30,7 +30,7 @@ -

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Parameters:
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Returns:
+ + + + + + +

+ + + + + getQuickAddTaxa() +

+ + + + + + +
+ Get the config options for the Taxa Quick Add feature. IF a SID is +configured, this will fetch the taxa from the repository. Otherwise, +it will return the object set on the quickAddTaxa attribute. +
+ + + + + + + + + + + + + +
+ + + + + + + + + + + + + + + + + + + + + + + + + + +
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+
+ + + + + + + +
+ + + + + + + + + + + + + + + + + + + + @@ -755,7 +851,7 @@
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diff --git a/docs/docs/EMLEntity.html b/docs/docs/EMLEntity.html index cf41520cd..46df9d975 100644 --- a/docs/docs/EMLEntity.html +++ b/docs/docs/EMLEntity.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLEntityView.html b/docs/docs/EMLEntityView.html index 66f9a2f8b..50ec90c96 100644 --- a/docs/docs/EMLEntityView.html +++ b/docs/docs/EMLEntityView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLGeoCoverage.html b/docs/docs/EMLGeoCoverage.html index 9bf1420fc..c0efa3197 100644 --- a/docs/docs/EMLGeoCoverage.html +++ b/docs/docs/EMLGeoCoverage.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLMeasurementScale.html b/docs/docs/EMLMeasurementScale.html index f06c315b2..90f6f0ad0 100644 --- a/docs/docs/EMLMeasurementScale.html +++ b/docs/docs/EMLMeasurementScale.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLMeasurementScaleView.html b/docs/docs/EMLMeasurementScaleView.html index e0bd214b1..1a1fc0661 100644 --- a/docs/docs/EMLMeasurementScaleView.html +++ b/docs/docs/EMLMeasurementScaleView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLMeasurementTypeView.html b/docs/docs/EMLMeasurementTypeView.html index 7635a2457..7cb86496f 100644 --- a/docs/docs/EMLMeasurementTypeView.html +++ b/docs/docs/EMLMeasurementTypeView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLMethodStep.html b/docs/docs/EMLMethodStep.html index 1df6de341..e88244eec 100644 --- a/docs/docs/EMLMethodStep.html +++ b/docs/docs/EMLMethodStep.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLMethods.html b/docs/docs/EMLMethods.html index 67c498aec..39e397e86 100644 --- a/docs/docs/EMLMethods.html +++ b/docs/docs/EMLMethods.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLMethodsView.html b/docs/docs/EMLMethodsView.html index aa1bf47d9..032dc09fb 100644 --- a/docs/docs/EMLMethodsView.html +++ b/docs/docs/EMLMethodsView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLNonNumericDomain.html b/docs/docs/EMLNonNumericDomain.html index e78bcfcef..f8168b716 100644 --- a/docs/docs/EMLNonNumericDomain.html +++ b/docs/docs/EMLNonNumericDomain.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLNumericDomain.html b/docs/docs/EMLNumericDomain.html index 535d0a388..8a5a0f790 100644 --- a/docs/docs/EMLNumericDomain.html +++ b/docs/docs/EMLNumericDomain.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLOtherEntity.html b/docs/docs/EMLOtherEntity.html index 1b34d89e8..e242471ad 100644 --- a/docs/docs/EMLOtherEntity.html +++ b/docs/docs/EMLOtherEntity.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLOtherEntityView.html b/docs/docs/EMLOtherEntityView.html index 42fbf7970..9c96fb815 100644 --- a/docs/docs/EMLOtherEntityView.html +++ b/docs/docs/EMLOtherEntityView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLParty.html b/docs/docs/EMLParty.html index 5838ebc2e..5c28fa556 100644 --- a/docs/docs/EMLParty.html +++ b/docs/docs/EMLParty.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLPartyView.html b/docs/docs/EMLPartyView.html index 5831a63f2..614958c0f 100644 --- a/docs/docs/EMLPartyView.html +++ b/docs/docs/EMLPartyView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLSpecializedText.html b/docs/docs/EMLSpecializedText.html index 5b600ff02..a971652d9 100644 --- a/docs/docs/EMLSpecializedText.html +++ b/docs/docs/EMLSpecializedText.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLTempCoverageView.html b/docs/docs/EMLTempCoverageView.html index 741b010b4..49fc143ac 100644 --- a/docs/docs/EMLTempCoverageView.html +++ b/docs/docs/EMLTempCoverageView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLTemporalCoverage.html b/docs/docs/EMLTemporalCoverage.html index c95ef6270..d3abd3650 100644 --- a/docs/docs/EMLTemporalCoverage.html +++ b/docs/docs/EMLTemporalCoverage.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLText.html b/docs/docs/EMLText.html index f1425084d..a61b3cdf3 100644 --- a/docs/docs/EMLText.html +++ b/docs/docs/EMLText.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLText211.html b/docs/docs/EMLText211.html index 68ea5e5d3..96083eefc 100644 --- a/docs/docs/EMLText211.html +++ b/docs/docs/EMLText211.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLUnit.html b/docs/docs/EMLUnit.html index 40ca72d69..2300bcf3a 100644 --- a/docs/docs/EMLUnit.html +++ b/docs/docs/EMLUnit.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

diff --git a/docs/docs/EMLView.html b/docs/docs/EMLView.html index 0abae36c7..5a5ceb777 100644 --- a/docs/docs/EMLView.html +++ b/docs/docs/EMLView.html @@ -30,7 +30,7 @@ -

Namespaces

Classes

Global

+

Namespaces

Classes

Global

@@ -743,7 +743,7 @@
Parameters:
Source:
@@ -779,12 +779,12 @@
Parameters:
-

- +

+ - movePersonDown(e:) + addTaxa(newClassifications)

@@ -793,7 +793,9 @@

- Attempt to move the current person (Party) one index forward (down). + Add new taxa to the EML model and re-render the taxa section. The new +taxa will be added to the first element in the EML +model. If there is no element, one will be created.
@@ -829,13 +831,13 @@

Parameters:
- e: + newClassifications -EventHandler +Array.<Object> @@ -845,7 +847,17 @@
Parameters:
- The click event handler + An array of objects with any of +the following properties: + - taxonRankName: (sting) The name of the taxonomic rank, e.g. + "Kingdom" + - taxonRankValue: (string) The value of the taxonomic rank, e.g. + "Animalia" + - commonName: (string) The common name of the taxon, e.g. "Animals" + - taxonId: (object) The official ID of the taxon, including "provider" + and "value". + - taxonomicClassification: (array) An array of nested taxonomic + classifications @@ -862,6 +874,9 @@
Parameters:
+
Since:
+
  • 2.24.0
+ @@ -886,7 +901,7 @@
Parameters:
Source:
@@ -915,6 +930,18 @@
Parameters:
+
Example
+ + 
this.addTaxon([{
+ taxonRankName: "Kingdom",
+ taxonRankValue: "Animalia",
+ commonName: "Animals",
+ taxonId: {
+   provider: "https://www.itis.gov/",
+   value: "202423"
+ }]);
+ + @@ -922,12 +949,12 @@
Parameters:
-

- +

+ - movePersonUp(e:) + getTaxonQuickAddOptions() → {Array.<Object>}

@@ -936,7 +963,8 @@

- Attempt to move the current person (Party) one index backward (up). + Get the list of options for the taxon quick add interface. Filter +out any that have already been added to the taxonomic coverage.
@@ -947,55 +975,6 @@

-

Parameters:
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
NameTypeDescription
e: - - -EventHandler - - - - The click event handler
- - @@ -1005,6 +984,9 @@
Parameters:
+
Since:
+
  • 2.24.0
+ @@ -1029,7 +1011,7 @@
Parameters:
Source:
@@ -1054,6 +1036,28 @@
Parameters:
+
Returns:
+ + +
+ An array of search select options +
+ + + +
+
+ Type +
+
+ +Array.<Object> + + +
+
+ + @@ -1065,12 +1069,12 @@
Parameters:
-

- +

+ - renderDataSensitivity() + makeNewTaxonomicClassificationRow() → {jQuery}

@@ -1079,7 +1083,7 @@

- Renders the Data Sensitivity section of the Editor using the data-sensitivity.html template. + Create the HTML for a new row in a taxonomicClassification table
@@ -1099,6 +1103,9 @@

+
Since:
+
  • 2.24.0
+ @@ -1123,7 +1130,7 @@

Source:
@@ -1138,10 +1145,6 @@

-

Fires:
-
    -
  • EML211View#event:editorInputsAdded
    • -
@@ -1152,7 +1155,29 @@
Fires:
+
Returns:
+ + +
+ A jQuery object containing the HTML for a new row +in a taxonomicClassification table +
+ + + +
+
+ Type +
+
+ +jQuery + + +
+
+ @@ -1164,12 +1189,12 @@
Fires:
-

- +

+ - renderPeopleDropdown() + makeTaxonomicClassificationRow(classification) → {jQuery}

@@ -1178,9 +1203,7 @@

- Creates and renders the dropdown at the bottom of the people section -that allows the user to create a new party type category. The dropdown -menu is saved to the view as view.partyMenu. + Create the HTML for a single row in a taxonomicClassification table
@@ -1191,6 +1214,58 @@

+

Parameters:
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
NameTypeDescription
classification + + +EMLTaxonCoverage#taxonomicClassification + + + + A +classification object from an EMLTaxonCoverage model, may include +a taxonRank, taxonValue, taxonId, commonName, and nested +taxonomicClassification objects
+ + @@ -1201,7 +1276,7 @@

Since:
-
  • 2.15.0
+
  • 2.24.0
@@ -1227,7 +1302,7 @@

Source:
@@ -1252,6 +1327,29 @@

+

Returns:
+ + +
+ A jQuery object containing the HTML for a single +row in a taxonomicClassification table +
+ + + +
+
+ Type +
+
+ +jQuery + + +
+
+ + @@ -1263,12 +1361,12 @@

-

- +

+ - renderPerson(emlParty, partyType) + movePersonDown(e:)

@@ -1277,7 +1375,7 @@

- Render the information provided for a given EML party in the party section. + Attempt to move the current person (Party) one index forward (down).
@@ -1313,13 +1411,13 @@

Parameters:
- emlParty + e: -EMLParty +EventHandler @@ -1329,42 +1427,33 @@
Parameters:
- the EMLParty model to render. If set to null, a new EML party will be created for the given party type. + The click event handler + + - - - partyType - - - - - -string - - - - - The party type for which to render a new EML party. E.g. "creator", "coPrincipalInvestigator", etc. - +
- - + + + + + -
+ @@ -1376,6 +1465,11 @@
Parameters:
+ +
Source:
+
@@ -1383,17 +1477,869 @@
Parameters:
+
+ + + + + + + + + + + + + + + + + + + + + + +

+ + + + movePersonUp(e:) +

-
Source:
-