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Fix calculatePathwayStatistics documentation #7

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AlexanderPico opened this issue Sep 18, 2016 · 0 comments

AlexanderPico commented Sep 18, 2016 •

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Via trial and error, it seems the correct order of arguments is different from the documentation (http://projects.bigcat.unimaas.nl/pathvisiorpc/documentation/pathway-statistics/) and published examples. I resolved stack trace errors with this parameter order:
#3 pgex
#4 gdb dir
#5 pathway dir
#6 criteria
#7 result dir

Confirmed order in code: https://github.com/PathVisio/PathVisioRPC/blob/master/src/org/pathvisio/xmlrpc/StatExport.java#L72

The argument order in the examples coincidentally matches that needed for getPathwayStatList()
https://github.com/PathVisio/PathVisioRPC/blob/master/src/org/pathvisio/xmlrpc/PathVisio.java#L1048

This example should be included in the stats docs. It is in fact what most people probably expect to find here (like me).

AlexanderPico mentioned this issue

Add to importData documentation #8

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