New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

QC for addressing false negatives (i.e., ground truth nuclei with no automated pre-segmentations) #207

Open

JustKeepClimbing opened this issue Nov 21, 2022 · 0 comments

Assignees

Labels

Collaborator

JustKeepClimbing commented Nov 21, 2022

Thinking about ways to address false negatives (as I see many assignments that have ground truth nuclei and are missing masks):

Sensei reviewers should add a new region to capture missed nucleus in a given assignment
Should have another page in ninjato for final QC to render whole volume and check for missed regions (we can view in Segmentor for now but not ideal)
100% progress bar should still have follow up whole volume QC to ensure no false negatives

JustKeepClimbing added the enhancement label

JustKeepClimbing assigned davidborland and hyi

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment