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I solved this problem in the digitizer macro files by converting them to commands supported by GATE 9.3. I altered scripts for the main digitizer in GATESubMacros and for each scanner in the ExampleScanners folder.
Also, you have to go to MainGATE.mac and change this:
DIGITISER
/control/execute GATESubMacros/[Name of the new digitizer mac located in GATESubMacros. Ex: NewDigitizer.mac]
Here are the scripts I did for the Digitizer. I had to put in .txt format because for some reason it doesn't let me upload .mac scripts here, but don't forget to change to that format.
This took 0.33s CPU time.
Sinogram saved as ./Output/Unlisted/UnlistedSinograms/Sino_Sim_1.Coincidences_S1R1
STIR-GATE-Connection Unlisting ROOT data script
Unlisting Output/Sim_1.Delayed.root
Unlisting with EXCLUDESCATTER = 0
Unlisting with EXCLUDERANDOM = 0
No AcceptanceProb given, unlist all using standard to lm_to_projdata
terminate called after throwing an instance of 'std::runtime_error'
what(): Error opening file Output/Sim_1.Delayed.root
./SubScripts/UnlistRoot.sh: line 155: 10817 Aborted (core dumped) lm_to_projdata ${LM_TO_PROJDATA_PAR_PATH}
ERROR in ./SubScripts/UnlistRoot.sh
ERROR in ./ExampleSTIR-GATE.sh
Could anyone explain to me? I have STIR version 6.0.0, is that a reason why it may not be recognizing seed and offset?
I solved this problem in the digitizer macro files by converting them to commands supported by GATE 9.3. I altered scripts for the main digitizer in GATESubMacros and for each scanner in the ExampleScanners folder.
Also, you have to go to MainGATE.mac and change this:
DIGITISER
/control/execute GATESubMacros/[Name of the new digitizer mac located in GATESubMacros. Ex: NewDigitizer.mac]
Here are the scripts I did for the Digitizer. I had to put in .txt format because for some reason it doesn't let me upload .mac scripts here, but don't forget to change to that format.
NewDigitizer_D690.txt
NewDigitizer.txt
NewDiditizer_mMR.txt
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