[BUG] Package manager stores same document twice

[dizzzz]

Describe the bug
When checking the logs during deployment i see that some files are stored twice (making the start process a bit longer)

01 Oct 2024 07:27:55,713 [main] INFO  (Deployment.java [installAndDeploy]:267) - Installing package file:///exist/autodeploy/packageservice-1.3.14.xar 
01 Oct 2024 07:27:56,219 [main] INFO  (Deployment.java [installAndDeploy]:280) - Deploying package http://exist-db.org/apps/existdb-packageservice 
01 Oct 2024 07:27:56,229 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/groups/packageservice.xml 
01 Oct 2024 07:27:56,254 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/groups/packageservice.xml 
01 Oct 2024 07:27:56,274 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/accounts/packageservice.xml 
01 Oct 2024 07:27:56,288 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/accounts/packageservice.xml 
01 Oct 2024 07:27:59,356 [main] INFO  (Deployment.java [installAndDeploy]:267) - Installing package file:///exist/autodeploy/dashboard-2.0.9.xar 
....
01 Oct 2024 07:28:40,705 [main] INFO  (Deployment.java [installAndDeploy]:267) - Installing package file:///exist/autodeploy/monex-4.0.1.xar 
01 Oct 2024 07:28:41,514 [main] INFO  (Deployment.java [installAndDeploy]:280) - Deploying package http://exist-db.org/apps/monex 
01 Oct 2024 07:28:41,675 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/groups/monex.xml 
01 Oct 2024 07:28:41,686 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/groups/monex.xml 
01 Oct 2024 07:28:41,749 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/accounts/monex.xml 
01 Oct 2024 07:28:41,759 [main] INFO  (Configurator.java [save]:1292) - Storing configuration /db/system/security/exist/accounts/monex.xml 

Expected behavior
Files should be stored once

To Reproduce
Regular start of eXIst-db in duncrum's provided docker container

Context (please always complete the following information)

• Build: [eXist-6.2.0]
• Java: [11]
• OS: [docker]