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Plan out the modules and subworkflows for v1.0 release #16
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Had a meeting with @Mxrcon , today. For Another thing, for the modules NOT present in |
Tools used and sub commands.here's my simple list about tools used and their sub commands Legend:
Feel free to suggest any changes if you disagree with my points, 😄 |
Okay, so I tried working with local modules and I realized that this would lead to major refactors later on, which is okay for the time being. But since there are already modules/tool folders in the The PR for bcftools modules is here nf-core/modules#641 |
Hey @abhi18av I've just updated my comment with checkmarks, What do you think about it? seems easier to track now. |
Ah, yes - thanks! |
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The inputs from |
Don't know, need to inspect. There are a couple of tools not available in BioConda actually. |
ok! let's see so. There's no pr mentioning it on bioconda? |
Updates from the meeting on 05-02-2022
Other known implementations of GWAS |
@abhi18av remember Saige https://github.com/weizhouUMICH/SAIGE |
For the initial release of the workflow
Plan out the overall modules and if not present in
nf-core/modules
repo, add them here first aslocal
modulesPlan out the sub-workflows which constitute the overall workflow
Create the relevant tasks on the project board https://github.com/orgs/nf-core/projects/18?add_cards_query=is%3Aopen
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