Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Run nextflow through docker #2

Open
abhi18av opened this issue Jul 19, 2020 · 3 comments
Open

Run nextflow through docker #2

abhi18av opened this issue Jul 19, 2020 · 3 comments
Assignees
@abhi18av @sharma-shruti
Labels
enhancement New feature or request help wanted Extra attention is needed

Comments

@abhi18av
Copy link
Member

This will simplify the overall installation process as we don't need to setup

  • java
  • conda
  • nextflow

Starting point

 docker pull nextflow/nextflow
@abhi18av abhi18av self-assigned this Jul 19, 2020
@abhi18av abhi18av changed the title Run nextflow by docker itself Run nextflow through docker Jul 19, 2020
@abhi18av abhi18av added enhancement New feature or request help wanted Extra attention is needed labels Jul 19, 2020
@abhi18av
Copy link
Member Author

Docker in docker

https://hub.docker.com/_/docker

@abhi18av
Copy link
Member Author

https://jpetazzo.github.io/2015/09/03/do-not-use-docker-in-docker-for-ci/

@abhi18av
Copy link
Member Author

Take hints by running rclone through docker

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@abhi18av abhi18av

@sharma-shruti sharma-shruti

Labels
enhancement New feature or request help wanted Extra attention is needed
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@abhi18av @sharma-shruti