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R package tidyverse not in the system library and can't be installed by user #294

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gaelso opened this issue Aug 14, 2023 · 0 comments
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@gaelso
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gaelso commented Aug 14, 2023

Describe the bug
The package tidyverse is listed in https://docs.sepal.io/en/latest/cli/r.html but not available in the System Library.

Installing it in the User Library fails:

Error: package or namespace load failed for ‘tidyverse’:
 .onAttach failed in attachNamespace() for 'tidyverse', details:
  call: NULL
  error: package or namespace load failed for ‘readr’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/usr/local/lib/R/site-library/readr/libs/readr.so':
  /usr/lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.29' not found (required by /usr/local/lib/R/site-library/readr/libs/readr.so)
Error: loading failed
Execution halted

To Reproduce
Go to Rstudio > Packages tab > System library
Tidyverse is not in the list

Otherwise run in the console:
install.packages("tidyverse")

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