From 792bad16e97b111daed7d4d307e261f057148d94 Mon Sep 17 00:00:00 2001 From: bailliem Date: Fri, 15 Mar 2024 22:19:35 +0100 Subject: [PATCH 1/4] Increment version number to 0.4.1 --- DESCRIPTION | 2 +- NEWS.md | 2 ++ man/visR-package.Rd | 1 + 3 files changed, 4 insertions(+), 1 deletion(-) diff --git a/DESCRIPTION b/DESCRIPTION index 7fad127b..877b29b1 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Type: Package Package: visR Title: Clinical Graphs and Tables Adhering to Graphical Principles -Version: 0.4.0 +Version: 0.4.1 Authors@R: c( person("Mark", "Baillie", , "bailliem@gmail.com", role = c("aut", "cre", "cph")), person("Diego", "Saldana", , "diego.saldana@roche.com", role = "aut"), diff --git a/NEWS.md b/NEWS.md index 2c12d2c8..34643d8f 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,3 +1,5 @@ +# visR 0.4.1 + # visR 0.4.0 * Functions `estimate_KM()` and `visr.survfit()` have been deprecated in favor of `ggsurvfit::ggsurvfit()`. diff --git a/man/visR-package.Rd b/man/visR-package.Rd index 7214c4e4..f068bf04 100644 --- a/man/visR-package.Rd +++ b/man/visR-package.Rd @@ -13,6 +13,7 @@ To enable fit-for-purpose, reusable clinical and medical research focused visual \seealso{ Useful links: \itemize{ + \item \url{https://openpharma.github.io/visR/} \item \url{https://github.com/openpharma/visR} \item Report bugs at \url{https://github.com/openpharma/visR/issues} } From 2c610c8233aa7be7fbdc61ba30e013b52df7cdf1 Mon Sep 17 00:00:00 2001 From: bailliem Date: Fri, 15 Mar 2024 22:27:27 +0100 Subject: [PATCH 2/4] readme --- README.md | 5 ++++- cran-comments.md | 4 +--- 2 files changed, 5 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index 6b3773c8..c354d28e 100644 --- a/README.md +++ b/README.md @@ -13,7 +13,7 @@ coverage](https://codecov.io/gh/openpharma/visR/branch/develop/graph/badge.svg)] [![R-CMD-check](https://github.com/openpharma/visR/workflows/R-CMD-check/badge.svg)](https://github.com/openpharma/visR/actions) [![CRAN status](https://www.r-pkg.org/badges/version/visR)](https://CRAN.R-project.org/package=visR) - + The goal of visR is to enable fit-for-purpose, reusable clinical and @@ -68,6 +68,7 @@ Please note that the `visR` project is released with a [Contributor Code of Conduct](CODE_OF_CONDUCT.md). By contributing to this project, you agree to abide by its terms. Thank you to all contributors: +[@ablack3](https://github.com/ablack3), [@AlexandraP-21](https://github.com/AlexandraP-21), [@ardeeshany](https://github.com/ardeeshany), [@bailliem](https://github.com/bailliem), @@ -89,9 +90,11 @@ agree to abide by its terms. Thank you to all contributors: [@kzalocusky](https://github.com/kzalocusky), [@lcomm](https://github.com/lcomm), [@lesniewa](https://github.com/lesniewa), +[@olivroy](https://github.com/olivroy), [@prabhushanmup](https://github.com/prabhushanmup), [@rebecca-albrecht](https://github.com/rebecca-albrecht), [@SHAESEN2](https://github.com/SHAESEN2), +[@teunbrand](https://github.com/teunbrand), [@thanos-siadimas](https://github.com/thanos-siadimas), [@therneau](https://github.com/therneau), [@thomas-neitmann](https://github.com/thomas-neitmann), diff --git a/cran-comments.md b/cran-comments.md index 43ededcf..d5848a44 100644 --- a/cran-comments.md +++ b/cran-comments.md @@ -1,9 +1,7 @@ ## Resubmission This is a resubmission. In this version I have: -* added notes that we are deprecating `visr.survfit()` and `visr.tidycuminc()`, recommending the use of {ggsurvfit} instead. -* Minor edit to documentation in `vis.R` to remove a note due to an itemized list. - +* updated package to ensure ompatibility with incoming version of ggplot2 3.5.0 ## Test environments * Ubuntu 18.04 LTS (on github actions), devel, release, oldrel-1, oldrel-2, oldrel-3, oldrel-4 From 397f1bfabf637de56b8c8d2bb01adc5d41434bd1 Mon Sep 17 00:00:00 2001 From: bailliem Date: Fri, 15 Mar 2024 22:34:26 +0100 Subject: [PATCH 3/4] cran submission --- CRAN-SUBMISSION | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/CRAN-SUBMISSION b/CRAN-SUBMISSION index 5ec15a20..c43eeb35 100644 --- a/CRAN-SUBMISSION +++ b/CRAN-SUBMISSION @@ -1,3 +1,3 @@ -Version: 0.4.0 -Date: 2023-11-20 18:11:15 UTC -SHA: 27b222093f72ed812a09055caecf1de1aae65658 +Version: 0.4.1 +Date: 2024-03-15 21:33:02 UTC +SHA: 2c610c8233aa7be7fbdc61ba30e013b52df7cdf1 From 6b4b2c9df79231b7fe9247ecface5abf994257ff Mon Sep 17 00:00:00 2001 From: bailliem Date: Fri, 15 Mar 2024 22:48:48 +0100 Subject: [PATCH 4/4] add future note to readme --- README.Rmd | 1 + README.md | 4 ++++ 2 files changed, 5 insertions(+) diff --git a/README.Rmd b/README.Rmd index 685a469c..c71ad5d2 100644 --- a/README.Rmd +++ b/README.Rmd @@ -37,6 +37,7 @@ riskmetric_score <- "visR" %>% +**Note**: We aim to keep visR maintained, but cannot commit to any future development. For all your KM plot needs, we would recommend checking out [ggsurvit](https://www.danieldsjoberg.com/ggsurvfit/). The goal of visR is to enable fit-for-purpose, reusable clinical and medical research focused visualizations and tables with sensible defaults and based on sound [graphical principles](https://graphicsprinciples.github.io/). diff --git a/README.md b/README.md index c354d28e..217e3ed8 100644 --- a/README.md +++ b/README.md @@ -16,6 +16,10 @@ status](https://www.r-pkg.org/badges/version/visR)](https://CRAN.R-project.org/p +**Note**: We aim to keep visR maintained, but cannot commit to any +future development. For all your KM plot needs, we would recommend +checking out [ggsurvit](https://www.danieldsjoberg.com/ggsurvfit/). + The goal of visR is to enable fit-for-purpose, reusable clinical and medical research focused visualizations and tables with sensible defaults and based on sound [graphical