diff --git a/AlphaFold2.ipynb b/AlphaFold2.ipynb index 4b3df70b..4b9f5757 100644 --- a/AlphaFold2.ipynb +++ b/AlphaFold2.ipynb @@ -57,6 +57,7 @@ "-----------\n", "\n", "### News\n", + "- 2023/07/27: ColabFold MSA server issue: We are using the backup server with old databases (UniRef30 2202/PDB70 220313) starting from ~8:30 AM CEST until we resolve the issue.\n", "- 2023/06/12: New databases! UniRef30 updated to 2023_02 and PDB to 230517. We now use PDB100 instead of PDB70 (see [notes](#pdb100)).\n", "- 2023/06/12: We introduced a new default pairing strategy: Previously, for multimer predictions with more than 2 chains, we only pair if all sequences taxonomically match (\"complete\" pairing). The new default \"greedy\" strategy pairs any taxonomically matching subsets." ] diff --git a/README.md b/README.md index ad3313d3..68c694a5 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,9 @@ # ColabFold - v1.5.2 ```diff +- 27Jul2023: ColabFold MSA server issue: +- We are using the backup server with old databases +- (UniRef30 2202/PDB70 220313) starting from ~8:30 AM CEST until we resolve the issue. + 12Jun2023: New databases! UniRef30 updated to 2302 and PDB to 230517. + We now use PDB100 instead of PDB70 (see notes in the [main](https://colabfold.com) notebook). + 12Jun2023: We introduced a new default pairing strategy: diff --git a/batch/AlphaFold2_batch.ipynb b/batch/AlphaFold2_batch.ipynb index a3df707f..2fd782b5 100644 --- a/batch/AlphaFold2_batch.ipynb +++ b/batch/AlphaFold2_batch.ipynb @@ -56,6 +56,7 @@ "-----------\n", "\n", "### News\n", + "- 2023/07/27: ColabFold MSA server issue: We are using the backup server with old databases (UniRef30 2202/PDB70 220313) starting from ~8:30 AM CEST until we resolve the issue.\n", "- 2023/06/12: New databases! UniRef30 updated to 2023_02 and PDB to 230517. We now use PDB100 instead of PDB70 (see notes in the [main](https://colabfold.com) notebook).\n", "- 2023/06/12: We introduced a new default pairing strategy: Previously, for multimer predictions with more than 2 chains, we only pair if all sequences taxonomically match (\"complete\" pairing). The new default \"greedy\" strategy pairs any taxonomically matching subsets." ]