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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 346 151

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 22 14

Repositories

Showing 10 of 397 repositories
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 3 BSD-3-Clause 1 50 6 Updated Nov 19, 2024
  • dynamic_routing_analysis Public

    Tools for accessing, processing and presenting data from Dynamic Routing experiments.

    AllenInstitute/dynamic_routing_analysis’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Nov 18, 2024
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 23 7 288 11 Updated Nov 18, 2024
  • cplAE_MET Public

    Coupled autoencoder extension for MET analysis.

    AllenInstitute/cplAE_MET’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Nov 18, 2024
  • ZeroMQ-XOP Public

    The ZeroMQ XOP enables Igor Pro to interface over the network using a ZeroMQ messaging layer and JSON as message format

    AllenInstitute/ZeroMQ-XOP’s past year of commit activity
    C 9 BSD-3-Clause 7 10 (1 issue needs help) 1 Updated Nov 18, 2024
  • npc_sessions_cache Public

    Scripts, notebooks and plots that operate on NWB or NWB-like objects from `npc_sessions` in the cloud.

    AllenInstitute/npc_sessions_cache’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 18, 2024
  • sciduck Public
    AllenInstitute/sciduck’s past year of commit activity
    Jupyter Notebook 1 BSD-3-Clause 2 4 0 Updated Nov 18, 2024
  • deep-neurographs Public

    Deep-Neurographs is a Python module that utilizes machine learning to detect and correct false splits in a predicted neuron segmentation.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Python 3 MIT 0 0 0 Updated Nov 18, 2024
  • scrattch.mapping Public

    Genearlized mapping scripts for RNA-seq and Patch-seq data

    AllenInstitute/scrattch.mapping’s past year of commit activity
    R 10 2 8 0 Updated Nov 18, 2024
  • AllenInstitute/scrattch.patchseq’s past year of commit activity
    R 0 1 0 0 Updated Nov 18, 2024