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Achievement: Arctic Code Vault Contributor

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Achievement: Arctic Code Vault Contributor

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BreenMS/README.md

👋 Hi there

Our team has three main research foci:

  1. We use multi-omic profiling to study the cellular and molecular mechanisms underlying rare neurodevelopmental disorders.

  2. We also design specific RNA editing therapuetics to treat them.

  3. We leverage large-scale transcriptomics to learn something new about the fundamentals of RNA editing in human brain development and disease.

Get in touch to learn more!

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  1. Developmental-RNA-editing Developmental-RNA-editing Public

    Spatiotemporal and genetic regulation of RNA editing across human brain development

    Perl 4 1

  2. Quantify-RNA-editing-from-bam-file Quantify-RNA-editing-from-bam-file Public

    Identify RNA editing sites from mapped bam files

    Perl 7 6

  3. Rapid-gene-set-enrichment Rapid-gene-set-enrichment Public

    Rapid gene set enrichment analysis across multiple user-defined gene lists

    R 1

  4. Geneset-preservation-analysis Geneset-preservation-analysis Public

    This directory contains code that enables geneset preservation analyses between two experimental conditions (e.g. cases vs. healthy controls).

    R 1

  5. RNA-editing-in-CNS-cell-types RNA-editing-in-CNS-cell-types Public

    Quantify RNA editing from CNS cell types

    Perl 4 1

  6. Umbilical-cord-blood-transcriptome-analysis Umbilical-cord-blood-transcriptome-analysis Public

    Computational code for describing changes in umbilical cord blood transcriptome profiles associated with maternal psychopathology

    R