baseline test

.circleci/config.yml

@@ -37,6 +37,8 @@ jobs:
       - run:
           name: nvm install node and UI dependencies
           command: |
+            echo "npm version is $(npm --version)"
+            echo "nvm version is $(/opt/circleci/.nvm/nvm.sh --version)"
             /opt/circleci/.nvm/nvm.sh install --lts
             cd ui
             npm install

servers/cromwell/jobs/controllers/utils/auth.py

@@ -4,6 +4,7 @@
 
 
 def requires_auth(fn):
+
     def wrapper(*args, **kwargs):
         auth_token = request.headers.get('Authentication')
         auth = _get_user_auth() if not current_app.config['use_caas'] else None

servers/cromwell/jobs/test/__init__.py

@@ -5,6 +5,7 @@
 
 
 class BaseTestCase(TestCase):
+
     def create_app(self):
         logging.getLogger('connexion.operation').setLevel('ERROR')
         app = connexion.App(__name__, specification_dir='../swagger/')

servers/cromwell/jobs/test/test_auth_utils.py

@@ -6,6 +6,7 @@
 
 
 class TestAuthUtils(BaseTestCase):
+
     def setUp(self):
         self.base_url = 'https://test-cromwell.org'
 

servers/cromwell/jobs/test/test_job_statuses.py

@@ -8,6 +8,7 @@
 
 
 class TestJobStatuses(BaseTestCase):
+
     def test_cromwell_execution_status_converts_correctly(self):
         for key, status in job_statuses.ApiStatus.__dict__.items():
             if not key.startswith('__'):

servers/cromwell/jobs/test/test_jobs_controller.py

@@ -984,6 +984,7 @@ def test_query_jobs_returns_200(self, mock_request):
 
         Query jobs by various filter criteria. Returned jobs are ordered from newest to oldest submission time.
         """
+
         def _request_callback(request, context):
             context.status_code = 200
             return {'results': [], 'totalResultsCount': 0}

servers/cromwell/jobs/test/test_task_statuses.py

@@ -33,6 +33,7 @@ def test_unrecognized_task_status_causes_exception(self):
             task_statuses.cromwell_execution_to_api('Not a valid task status')
 
     def test_scattered_task_status(self):
+
         def failed_scattered_task():
             return [
                 Shard(execution_status='Failed'),

servers/dsub/jobs/test/base_google_test_cases.py

@@ -13,7 +13,9 @@
 
 
 class BaseGoogleTestCases:
+
     class BaseGoogleTestCase(BaseTestCases.JobsControllerTestCase):
+
         @classmethod
         def setUpClass(cls):
             super(BaseGoogleTestCases.BaseGoogleTestCase, cls).setUpClass()

servers/dsub/jobs/test/base_test_cases.py

@@ -29,14 +29,17 @@
 
 
 class BaseTestCases:
+
     class BaseTestCase(flask_testing.TestCase):
+
         def assert_status(self, response, want, desc=None):
             if not desc:
                 desc = 'Response body is : ' + response.data.decode('utf-8')
             super(BaseTestCases.BaseTestCase,
                   self).assertStatus(response, want, desc)
 
     class JobsControllerTestCase(BaseTestCase):
+
         @classmethod
         def setUpClass(cls):
             cls.testing_root = None

servers/dsub/jobs/test/test_jobs_controller_google.py

@@ -5,6 +5,7 @@
 
 class TestJobsControllerGoogle(BaseGoogleTestCases.BaseGoogleTestCase):
     """ JobsController integration tests for the google provider """
+
     def create_app(self):
         app = super(TestJobsControllerGoogle, self).create_app()
         app.config.update({

servers/dsub/jobs/test/test_jobs_controller_google_v2.py

@@ -5,6 +5,7 @@
 
 class TestJobsControllerGoogleV2(BaseGoogleTestCases.BaseGoogleTestCase):
     """ JobsController integration tests for the google v2 provider """
+
     def create_app(self):
         app = super(TestJobsControllerGoogleV2, self).create_app()
         app.config.update({

servers/dsub/jobs/test/test_jobs_controller_local.py

@@ -18,6 +18,7 @@
 
 class TestJobsControllerLocal(BaseTestCases.JobsControllerTestCase):
     """ JobsController integration tests for local provider """
+
     @classmethod
     def setUpClass(cls):
         super(TestJobsControllerLocal, cls).setUpClass()

servers/jm_utils/jm_utils/test/test_page_tokens.py

@@ -11,6 +11,7 @@
 
 class TestJmUtils(unittest.TestCase):
     """ jm_utils unit tests """
+
     def test_encode_decode_offset(self):
         encoded = page_tokens.encode_offset(12)
         decoded = page_tokens.decode_offset(encoded)