Added Dockerfile to continue creating docker image, mistakingly deleted

.dockerignore

@@ -0,0 +1,7 @@
+main/src/tests
+/docs
+/.github
+*~
+**/.ipynb_checkpoints/
+README.md
+LICENSE

Dockerfile

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+FROM jupyter/r-notebook:latest
+
+COPY /environment.yaml "${HOME}/environment.yaml"
+COPY --chown=1000:100 main "${HOME}"/main
+
+# Install python-related items
+# Remove "python" from the pinned file so we can install our own version
+RUN sed -i '/^python/d' /opt/conda/conda-meta/pinned && \
+    conda config --quiet --add channels conda-forge && \
+    conda config --quiet --add channels bioconda && \
+    conda config --quiet --add channels r && \
+    # Update conda
+    mamba env update --name=base --file="${HOME}/environment.yaml" && \
+    R -e "devtools::install_github('babessell1/zFPKM')" && \
+    # Trust the jupyter notebook
+    jupyter trust "${HOME}/main/COMO.ipynb" && \
+    echo "c.ServerApp.ip = '0.0.0.0'" >> "${HOME}/.jupyter/jupyter_notebook_config.py" && \
+    echo "c.ServerApp.root_dir = '${HOME}/main'" >> "${HOME}/.jupyter/jupyter_notebook_config.py" && \
+    echo "c.ServerApp.token = ''" >> "${HOME}/.jupyter/jupyter_notebook_config.py" && \
+    echo "c.ServerApp.password = ''" >> "${HOME}/.jupyter/jupyter_notebook_config.py" && \
+    # Purge cache information, reducing image size
+    pip cache purge && \
+    conda clean --all --yes --force-pkgs-dirs && \
+    rm -f "${HOME}/environment.yaml"
+
+VOLUME /home/joyvan/main/data/local_files