Releases: ImagingDataCommons/IDC-Tutorials
Releases · ImagingDataCommons/IDC-Tutorials
0.19.0
What's Changed
- Update colab images list by @github-actions in #54
- Update colab images list by @github-actions in #56
- initial version SR annotations demo notebook by @fedorov in #57
- Update on RMS annotation notebook by @DanielaSchacherer in #58
- Added ISBI'24 Tutorial by @DanielaSchacherer in #59
- Improvements to ISBI Tutorial by @DanielaSchacherer in #60
- Fixed spelling mistake in Colab link by @DanielaSchacherer in #61
- RMS notebook updates by @DanielaSchacherer in #62
- Update getting started to use idc-index by @fedorov in #63
- fix links and try to fix image preview by @fedorov in #64
- Refinements for ISBI Tutorial by @DanielaSchacherer in #65
- Reviewed RMS notebook by @DanielaSchacherer in #66
- ENH: added new introductory notebook by @DanielaSchacherer in #70
- fixed idc-index version by @DanielaSchacherer in #71
- pathology getting started notebook update by @DanielaSchacherer in #73
- Pathology notebook update by @DanielaSchacherer in #74
Full Changelog: 0.2.0...0.19.0
Contributors
fedorov and DanielaSchacherer
Assets 2
0.2.0
What's Changed
- Bump grpcio from 1.41.0 to 1.53.0 in /scripts by @dependabot in #27
- Bump certifi from 2022.12.7 to 2023.7.22 in /scripts by @dependabot in #29
- Add the Colab R test notebook by @denbonte in #31
- update segmentation primer notebook by @fedorov in #32
- add IDC on AWS tutorial notebook by @flamingofugang in #34
- Clean up notebook for IDC on AWS notebook by @flamingofugang in #36
- A github actions workflow to test if getting_started colab notebooks running properly in latest colab docker runtime env. by @vkt1414 in #38
- lock python and pip package versions by @vkt1414 in #39
- do not commit the updated papermill output notebooks by @fedorov in #40
- Bump urllib3 from 1.26.7 to 1.26.18 in /scripts by @dependabot in #35
- Reorganization and cleanup of the repository by @fedorov in #41
- more reorganization of the repo by @fedorov in #42
- add IDC MICCAI'23 tutorial MHub notebook by @fedorov in #43
- Updated README in pathomics folder with link to publication (instead of preprint) by @DanielaSchacherer in #44
- Create keep-alive.yml by @vkt1414 in #48
- Fix github actions by @vkt1414 in #47
- IDC API colab submit by @bcli4d in #50
- Update colab images list by @github-actions in #52
New Contributors
- @denbonte made their first contribution in #31
- @flamingofugang made their first contribution in #34
- @DanielaSchacherer made their first contribution in #44
- @github-actions made their first contribution in #52
Full Changelog: v0.1.0...0.2.0
Attachment medsam_vit_b.pth contains the file originally downloaded from https://drive.google.com/uc?id=1UAmWL88roYR7wKlnApw5Bcuzf2iQgk6_ (mentioned in the MedSAM tutorial notebook https://colab.research.google.com/drive/1N4wv9jljtEZ_w-f92iOLXCdkD-KJlsJH?usp=sharing). See https://github.com/bowang-lab/MedSAM/blob/main/tutorial_quickstart.ipynb for details. The file is replicated for archival purposes and to streamline the download process.
Contributors
fedorov, flamingofugang, and 5 other contributors
Assets 6
RSNA2023
latest
Initial release
The purpose of this release is to establish a more persistent and easier to reference framework for IDC tutorial development.
What's Changed
- small refinements and todo items added by @fedorov in #1
- Duplicate from IDC-API by @bcli4d in #2
- bug fixes and improvements by @fedorov in #3
- Add new dependencies by @wlongabaugh in #4
- Fix thread arg by @wlongabaugh in #5
- adding notebook for body part regression by @deepakri201 in #7
- Now supports PKCE by @bcli4d in #10
- reorganization of the introduction tutorial series by @fedorov in #14
- found a potential typo by @vkt1414 in #16
- Bump certifi from 2021.10.8 to 2022.12.7 in /scripts by @dependabot in #15
- Bump protobuf from 3.18.1 to 3.18.3 in /scripts by @dependabot in #17
- Update examples to use itkwidgets for visualization by @bnmajor in #22
- Bump itkwidgets version by @bnmajor in #24
- Missing metadata tag by @bnmajor in #25
- Bump requests from 2.26.0 to 2.31.0 in /scripts by @dependabot in #26
New Contributors
- @fedorov made their first contribution in #1
- @bcli4d made their first contribution in #2
- @wlongabaugh made their first contribution in #4
- @deepakri201 made their first contribution in #7
- @vkt1414 made their first contribution in #16
- @dependabot made their first contribution in #15
- @bnmajor made their first contribution in #22
Full Changelog: https://github.com/ImagingDataCommons/IDC-Tutorials/commits/v0.1.0
Contributors
fedorov, wlongabaugh, and 5 other contributors