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Tolias Lab

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  1. scanreader scanreader Public

    Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).

    Python 9 12

  2. FPGAEyeTracker FPGAEyeTracker Public

    FPGA EyeTracker

    LabVIEW 4 3

  3. cov-est cov-est Public

    Covariance estimation library used in "Improved Estimation and Interpretation of Correlations in Neural Circuits."

    MATLAB 4 4

  4. neuropixel-pipeline neuropixel-pipeline Public

    Schemata and libraries for ingesting and clustering Neuropixel data

    Python 4 2

  5. ephys-preprocessing ephys-preprocessing Public

    Pre-processing (LFP extraction, spike detection etc.) for electrophysiology data

    MATLAB 3

  6. atflow atflow Public

    TensorFlow library for Andreas Tolias lab

    Python 2 2

Repositories

Showing 10 of 40 repositories
  • mosaic-picasso Public Forked from xing-lab-pitt/mosaic-picasso

    Crosstalk removal for multiplex fluorescence imaging; Method for calculating and eliminating LBM cavity crosstalk

    atlab/mosaic-picasso’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Nov 5, 2024
  • pipeline Public Forked from cajal/pipeline

    Schemata and libraries for neuroscientific data

    atlab/pipeline’s past year of commit activity
    Python 0 LGPL-3.0 44 1 1 Updated Oct 28, 2024
  • PatchViewer Public

    Slice imaging program for patching

    atlab/PatchViewer’s past year of commit activity
    LabVIEW 0 0 0 0 Updated Jun 26, 2024
  • datajoint-python Public Forked from datajoint/datajoint-python

    Relational data pipelines for the science lab

    atlab/datajoint-python’s past year of commit activity
    Python 0 LGPL-2.1 86 0 0 Updated Sep 27, 2023
  • neuropixel-pipeline Public

    Schemata and libraries for ingesting and clustering Neuropixel data

    atlab/neuropixel-pipeline’s past year of commit activity
    Python 4 GPL-3.0 2 0 0 Updated Jun 27, 2023
  • PyMouse Public Forked from olakiril/PyMouse_atlab

    Behavioral conditioning with mice

    atlab/PyMouse’s past year of commit activity
    Python 0 6 0 0 Updated Apr 27, 2023
  • scanreader Public

    Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).

    atlab/scanreader’s past year of commit activity
    Python 9 MIT 12 4 0 Updated May 2, 2022
  • pytorch-docker Public

    Docker image for Pytorch

    atlab/pytorch-docker’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Feb 8, 2022
  • CaImAn Public Forked from ecobost/CaImAn

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    atlab/CaImAn’s past year of commit activity
    Jupyter Notebook 1 GPL-2.0 371 0 0 Updated Sep 5, 2021
  • gpu-deploy Public

    Fabric library for Docker GPU deployment

    atlab/gpu-deploy’s past year of commit activity
    Python 0 3 0 0 Updated Jul 21, 2021
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