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@berkeleybop

Berkeley BOP

Welcome to BBOP!

Berkeley Bioinformatics Open-source Projects (BBOP), located at the Lawrence Berkeley National Laboratory, is a group of scientific researchers and software engineers dedicated to developing tools and applying computational technologies to problems in biology and biomedicine.

This GitHub organization houses our website content and various other repos for public or internal use.

For more info about BBOP, including our people and projects, please see our website!

Popular repositories Loading

  1. artificial-intelligence-ontology artificial-intelligence-ontology Public

    An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as well as AI/ML potential biases.

    Jupyter Notebook 16 3

  2. jbrowse jbrowse Public

    Forked from GMOD/jbrowse

    AJAX Genome Browser

    JavaScript 13 2

  3. lsi.sh lsi.sh Public

    MegaCLI script to configure and monitor LSI raid cards.

    Shell 13 6

  4. bbop-js bbop-js Public

    Cross-platform client and server JavaScript library, with a concentration on Solr, graphs, utilities, and convenience methods.

    JavaScript 6 5

  5. berkeleybop.github.io berkeleybop.github.io Public

    Homepages for the Berkeley BOP.

    CSS 4 10

  6. kgviz-model kgviz-model Public

    Schema for configurations / stylesheets for visualizing ontology and KGs

    Python 4

Repositories

Showing 10 of 36 repositories
  • artificial-intelligence-ontology Public

    An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as well as AI/ML potential biases.

    berkeleybop/artificial-intelligence-ontology’s past year of commit activity
    Jupyter Notebook 16 3 55 0 Updated Aug 20, 2024
  • berkeleybop.github.io Public

    Homepages for the Berkeley BOP.

    berkeleybop/berkeleybop.github.io’s past year of commit activity
    CSS 4 GPL-2.0 10 3 0 Updated Aug 15, 2024
  • bbop-manager-golr Public

    Manager for handling communication and callbacks with GOlr instances.

    berkeleybop/bbop-manager-golr’s past year of commit activity
    HTML 0 BSD-3-Clause 1 6 1 Updated Jun 11, 2024
  • bbop-core Public

    A set of useful and common JavaScript functions to supplement other more basic utility libraries.

    berkeleybop/bbop-core’s past year of commit activity
    JavaScript 0 BSD-3-Clause 1 0 0 Updated Jun 11, 2024
  • bbop-rest-manager Public

    The is the "new" version of the manager event model for BBOP systems.

    berkeleybop/bbop-rest-manager’s past year of commit activity
    JavaScript 1 2 2 2 Updated Nov 27, 2023
  • bero Public

    Biological and Environmental Research Ontology (BERO)

    berkeleybop/bero’s past year of commit activity
    Makefile 1 MIT 0 1 0 Updated Mar 28, 2023
  • lsi.sh Public

    MegaCLI script to configure and monitor LSI raid cards.

    berkeleybop/lsi.sh’s past year of commit activity
    Shell 13 CC-BY-SA-4.0 6 0 0 Updated Jan 13, 2023
  • kgviz-model Public

    Schema for configurations / stylesheets for visualizing ontology and KGs

    berkeleybop/kgviz-model’s past year of commit activity
    Python 4 0 1 0 Updated Aug 17, 2022
  • bbop-graph Public

    General purpose (mathematical) graph library in JavaScript.

    berkeleybop/bbop-graph’s past year of commit activity
    JavaScript 2 BSD-3-Clause 4 3 0 Updated Aug 10, 2022
  • .github Public
    berkeleybop/.github’s past year of commit activity
    0 0 0 0 Updated May 12, 2022

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