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Merge cellfinder-core and cellfinder-napari into this package #4

Merge cellfinder-core and cellfinder-napari into this package

Merge cellfinder-core and cellfinder-napari into this package #4

name: Test Tensorflow include guards
# These tests check that the include guards checking for tensorflow's availability
# behave as expected on ubuntu and macOS.
on:
pull_request:
push:
branches:
- main
jobs:
tensorflow_guards:
name: Test include guards
strategy:
matrix:
os: [ubuntu-latest, macos-latest]
runs-on: ${{ matrix.os }}
steps:
- name: Check out repository
uses: actions/checkout@v3
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Install via pip
run: python -m pip install -e .
- name: Test (working) import
uses: jannekem/run-python-script-action@v1
with:
fail-on-error: true
script: |
import cellfinder.core
import cellfinder.napari
- name: Uninstall tensorflow
run: python -m pip uninstall -y tensorflow
- name: Test (broken) import
id: broken_import
uses: jannekem/run-python-script-action@v1
with:
fail-on-error: false
script: |
import cellfinder.core
# exit 1 will force an actions exit with a failure reported
- name: Flag error thrown by broken import
if: steps.broken_import.outputs.error == 'false'
run: |
echo "Broken import test result was: ${{ steps.broken_import.outputs.error }}"
exit 1
# add an additional step to confirm an error occurred in the import
- name: Confirm error was thrown by broken import
if: steps.broken_import.outputs.error == 'true'
run: |
echo "Broken import test result was: ${{ steps.broken_import.outputs.error }}"