Dev docs nilearn/nilearn@4412c42 : Change default in docstring (#4489)

* change default clustering_percentile in docstring * only used with FREM * fix precommit ci
nilearn · Jul 11, 2024 · a1de508 · a1de508
1 parent 256cd09
commit a1de508
Show file tree

Hide file tree

Showing 663 changed files with 3,783 additions and 6,458 deletions.
diff --git a/dev/.buildinfo b/dev/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 7137a7b819e39003d50ccc1fa68ba9a2
+config: 0f2489d3c732f86f1a51e2ee2106f54f
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip
diff --git a/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip
diff --git a/dev/_images/sphx_glr_plot_advanced_decoding_scikit_001.png b/dev/_images/sphx_glr_plot_advanced_decoding_scikit_001.png
diff --git a/dev/_images/sphx_glr_plot_advanced_decoding_scikit_thumb.png b/dev/_images/sphx_glr_plot_advanced_decoding_scikit_thumb.png
diff --git a/dev/_images/sphx_glr_plot_beta_series_001.png b/dev/_images/sphx_glr_plot_beta_series_001.png
diff --git a/dev/_images/sphx_glr_plot_beta_series_002.png b/dev/_images/sphx_glr_plot_beta_series_002.png
diff --git a/dev/_images/sphx_glr_plot_beta_series_003.png b/dev/_images/sphx_glr_plot_beta_series_003.png
diff --git a/dev/_images/sphx_glr_plot_beta_series_004.png b/dev/_images/sphx_glr_plot_beta_series_004.png
diff --git a/dev/_images/sphx_glr_plot_beta_series_005.png b/dev/_images/sphx_glr_plot_beta_series_005.png
diff --git a/dev/_images/sphx_glr_plot_beta_series_thumb.png b/dev/_images/sphx_glr_plot_beta_series_thumb.png
diff --git a/dev/_images/sphx_glr_plot_bids_analysis_001.png b/dev/_images/sphx_glr_plot_bids_analysis_001.png
diff --git a/dev/_images/sphx_glr_plot_bids_analysis_002.png b/dev/_images/sphx_glr_plot_bids_analysis_002.png
diff --git a/dev/_images/sphx_glr_plot_bids_analysis_thumb.png b/dev/_images/sphx_glr_plot_bids_analysis_thumb.png
diff --git a/dev/_images/sphx_glr_plot_design_matrix_001.png b/dev/_images/sphx_glr_plot_design_matrix_001.png
diff --git a/dev/_images/sphx_glr_plot_design_matrix_002.png b/dev/_images/sphx_glr_plot_design_matrix_002.png
diff --git a/dev/_images/sphx_glr_plot_design_matrix_thumb.png b/dev/_images/sphx_glr_plot_design_matrix_thumb.png
diff --git a/dev/_images/sphx_glr_plot_first_level_details_024.png b/dev/_images/sphx_glr_plot_first_level_details_024.png
diff --git a/dev/_images/sphx_glr_plot_haxby_anova_svm_001.png b/dev/_images/sphx_glr_plot_haxby_anova_svm_001.png
diff --git a/dev/_images/sphx_glr_plot_haxby_anova_svm_thumb.png b/dev/_images/sphx_glr_plot_haxby_anova_svm_thumb.png
diff --git a/dev/_images/sphx_glr_plot_haxby_different_estimators_001.png b/dev/_images/sphx_glr_plot_haxby_different_estimators_001.png
diff --git a/dev/_images/sphx_glr_plot_haxby_different_estimators_002.png b/dev/_images/sphx_glr_plot_haxby_different_estimators_002.png
diff --git a/dev/_images/sphx_glr_plot_haxby_different_estimators_005.png b/dev/_images/sphx_glr_plot_haxby_different_estimators_005.png
diff --git a/dev/_images/sphx_glr_plot_haxby_different_estimators_thumb.png b/dev/_images/sphx_glr_plot_haxby_different_estimators_thumb.png
diff --git a/dev/_images/sphx_glr_plot_haxby_frem_002.png b/dev/_images/sphx_glr_plot_haxby_frem_002.png
diff --git a/dev/_images/sphx_glr_plot_haxby_grid_search_001.png b/dev/_images/sphx_glr_plot_haxby_grid_search_001.png
diff --git a/dev/_images/sphx_glr_plot_haxby_grid_search_thumb.png b/dev/_images/sphx_glr_plot_haxby_grid_search_thumb.png
diff --git a/dev/_images/sphx_glr_plot_haxby_mass_univariate_002.png b/dev/_images/sphx_glr_plot_haxby_mass_univariate_002.png
diff --git a/dev/_images/sphx_glr_plot_haxby_searchlight_001.png b/dev/_images/sphx_glr_plot_haxby_searchlight_001.png
diff --git a/dev/_images/sphx_glr_plot_haxby_searchlight_thumb.png b/dev/_images/sphx_glr_plot_haxby_searchlight_thumb.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_001.png b/dev/_images/sphx_glr_plot_ica_neurovault_001.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_002.png b/dev/_images/sphx_glr_plot_ica_neurovault_002.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_003.png b/dev/_images/sphx_glr_plot_ica_neurovault_003.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_004.png b/dev/_images/sphx_glr_plot_ica_neurovault_004.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_005.png b/dev/_images/sphx_glr_plot_ica_neurovault_005.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_006.png b/dev/_images/sphx_glr_plot_ica_neurovault_006.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_007.png b/dev/_images/sphx_glr_plot_ica_neurovault_007.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_008.png b/dev/_images/sphx_glr_plot_ica_neurovault_008.png
diff --git a/dev/_images/sphx_glr_plot_ica_neurovault_thumb.png b/dev/_images/sphx_glr_plot_ica_neurovault_thumb.png
diff --git a/dev/_images/sphx_glr_plot_localizer_mass_univariate_methods_001.png b/dev/_images/sphx_glr_plot_localizer_mass_univariate_methods_001.png
diff --git a/dev/_images/sphx_glr_plot_localizer_mass_univariate_methods_thumb.png b/dev/_images/sphx_glr_plot_localizer_mass_univariate_methods_thumb.png
diff --git a/dev/_images/sphx_glr_plot_neurovault_meta_analysis_001.png b/dev/_images/sphx_glr_plot_neurovault_meta_analysis_001.png
diff --git a/dev/_images/sphx_glr_plot_neurovault_meta_analysis_002.png b/dev/_images/sphx_glr_plot_neurovault_meta_analysis_002.png
diff --git a/dev/_images/sphx_glr_plot_neurovault_meta_analysis_003.png b/dev/_images/sphx_glr_plot_neurovault_meta_analysis_003.png
diff --git a/dev/_images/sphx_glr_plot_neurovault_meta_analysis_004.png b/dev/_images/sphx_glr_plot_neurovault_meta_analysis_004.png
diff --git a/dev/_images/sphx_glr_plot_neurovault_meta_analysis_005.png b/dev/_images/sphx_glr_plot_neurovault_meta_analysis_005.png
diff --git a/dev/_images/sphx_glr_plot_neurovault_meta_analysis_007.png b/dev/_images/sphx_glr_plot_neurovault_meta_analysis_007.png
diff --git a/dev/_images/sphx_glr_plot_neurovault_meta_analysis_thumb.png b/dev/_images/sphx_glr_plot_neurovault_meta_analysis_thumb.png
diff --git a/dev/_images/sphx_glr_plot_oasis_vbm_004.png b/dev/_images/sphx_glr_plot_oasis_vbm_004.png
diff --git a/dev/_images/sphx_glr_plot_second_level_association_test_003.png b/dev/_images/sphx_glr_plot_second_level_association_test_003.png
diff --git a/dev/_images/sphx_glr_plot_second_level_one_sample_test_003.png b/dev/_images/sphx_glr_plot_second_level_one_sample_test_003.png
diff --git a/dev/_images/sphx_glr_plot_simulated_data_002.png b/dev/_images/sphx_glr_plot_simulated_data_002.png
diff --git a/dev/_images/sphx_glr_plot_simulated_data_003.png b/dev/_images/sphx_glr_plot_simulated_data_003.png
diff --git a/dev/_images/sphx_glr_plot_simulated_data_006.png b/dev/_images/sphx_glr_plot_simulated_data_006.png
diff --git a/dev/_sources/auto_examples/00_tutorials/plot_3d_and_4d_niimg.rst.txt b/dev/_sources/auto_examples/00_tutorials/plot_3d_and_4d_niimg.rst.txt
@@ -73,7 +73,7 @@ from a :term:`Neurovault` repository
 
  .. code-block:: none
 
-    [get_dataset_dir] Dataset created in /home/runner/work/nilearn/nilearn/nilearn_data/neurovault
+    [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/neurovault
 
     ['/home/runner/work/nilearn/nilearn/nilearn_data/neurovault/collection_658/image_10426.nii.gz']
 
@@ -127,7 +127,7 @@ statistical map:
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38b98f6db0>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbc6f7a360>
 
 
 
@@ -156,7 +156,7 @@ Visualizing works better with a threshold
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38b518a3c0>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbbfa6df70>
 
 
 
@@ -183,10 +183,7 @@ correspondence between rest and task
 
  .. code-block:: none
 
-    [get_dataset_dir] Dataset created in /home/runner/work/nilearn/nilearn/nilearn_data/smith_2009
-    [fetch_single_file] Downloading data from https://www.fmrib.ox.ac.uk/datasets/brainmap+rsns/PNAS_Smith09_rsn10.nii.gz ...
-    [fetch_single_file]  ...done. (1 seconds, 0 min)
-
+    [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/smith_2009
 
     '/home/runner/work/nilearn/nilearn/nilearn_data/smith_2009/PNAS_Smith09_rsn10.nii.gz'
 
@@ -269,7 +266,7 @@ We can then plot it
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38b4052c00>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbbf9543b0>
 
 
 
@@ -480,9 +477,9 @@ image.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 22.740 seconds)
+   **Total running time of the script:** (0 minutes 18.012 seconds)
 
-**Estimated memory usage:**  213 MB
+**Estimated memory usage:**  214 MB
 
 
 .. _sphx_glr_download_auto_examples_00_tutorials_plot_3d_and_4d_niimg.py:

diff --git a/dev/_sources/auto_examples/00_tutorials/plot_decoding_tutorial.rst.txt b/dev/_sources/auto_examples/00_tutorials/plot_decoding_tutorial.rst.txt
diff --git a/dev/_sources/auto_examples/00_tutorials/plot_nilearn_101.rst.txt b/dev/_sources/auto_examples/00_tutorials/plot_nilearn_101.rst.txt
@@ -77,7 +77,7 @@ Let's quickly plot this file:
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38b51b31a0>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbc5338cb0>
 
 
 
@@ -125,7 +125,7 @@ Here we give as inputs the image filename and the smoothing value in mm
  .. code-block:: none
 
 
-    <nibabel.nifti1.Nifti1Image object at 0x7f38b4086c30>
+    <nibabel.nifti1.Nifti1Image object at 0x7fbbbb1da960>
 
 
 
@@ -154,7 +154,7 @@ instance to look at it
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38b4087b30>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbbb1da660>
 
 
 
@@ -184,7 +184,7 @@ We could also pass it to the smoothing function
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38b40850d0>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbbfa114c0>
 
 
 
@@ -217,28 +217,7 @@ First let's fetch Haxby dataset for subject 1 and 2
 
  .. code-block:: none
 
-    [get_dataset_dir] Dataset created in /home/runner/work/nilearn/nilearn/nilearn_data/haxby2001
-    [fetch_single_file] Downloading data from https://www.nitrc.org/frs/download.php/7868/mask.nii.gz ...
-    [fetch_single_file]  ...done. (0 seconds, 0 min)
-
-    [fetch_single_file] Downloading data from http://data.pymvpa.org/datasets/haxby2001/MD5SUMS ...
-    [fetch_single_file]  ...done. (0 seconds, 0 min)
-
-    [fetch_single_file] Downloading data from http://data.pymvpa.org/datasets/haxby2001/subj1-2010.01.14.tar.gz ...
-    [_chunk_read_]     Downloaded 129933312 of 314803244 bytes (41.3%,    1.4s remaining)
-    [_chunk_read_]     Downloaded 295239680 of 314803244 bytes (93.8%,    0.1s remaining)
-    [fetch_single_file]  ...done. (2 seconds, 0 min)
-
-    [uncompress_file] Extracting data from /home/runner/work/nilearn/nilearn/nilearn_data/haxby2001/b6297e3e4eedbdbfb999e3188d364506/subj1-2010.01.14.tar.gz...
-    [uncompress_file] .. done.
-
-    [fetch_single_file] Downloading data from http://data.pymvpa.org/datasets/haxby2001/subj2-2010.01.14.tar.gz ...
-    [_chunk_read_]     Downloaded 144744448 of 291168628 bytes (49.7%,    1.0s remaining)
-    [fetch_single_file]  ...done. (2 seconds, 0 min)
-
-    [uncompress_file] Extracting data from /home/runner/work/nilearn/nilearn/nilearn_data/haxby2001/b6297e3e4eedbdbfb999e3188d364506/subj2-2010.01.14.tar.gz...
-    [uncompress_file] .. done.
-
+    [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/haxby2001
 
 
 
@@ -368,9 +347,9 @@ passed on to other nilearn tools, or saved to disk.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 14.636 seconds)
+   **Total running time of the script:** (0 minutes 5.912 seconds)
 
-**Estimated memory usage:**  194 MB
+**Estimated memory usage:**  169 MB
 
 
 .. _sphx_glr_download_auto_examples_00_tutorials_plot_nilearn_101.py:

diff --git a/dev/_sources/auto_examples/00_tutorials/plot_python_101.rst.txt b/dev/_sources/auto_examples/00_tutorials/plot_python_101.rst.txt
@@ -67,14 +67,14 @@ A simple example of basic Python numerics and how to plot it.
  .. code-block:: none
 
 
-    [<matplotlib.lines.Line2D object at 0x7f38b522c470>]
+    [<matplotlib.lines.Line2D object at 0x7fbbc0b78d40>]
 
 
 
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 0.214 seconds)
+   **Total running time of the script:** (0 minutes 0.210 seconds)
 
 **Estimated memory usage:**  10 MB
 

diff --git a/dev/_sources/auto_examples/00_tutorials/plot_single_subject_single_run.rst.txt b/dev/_sources/auto_examples/00_tutorials/plot_single_subject_single_run.rst.txt
@@ -81,21 +81,7 @@ Retrieving the data
 
  .. code-block:: none
 
-    [get_dataset_dir] Dataset created in /home/runner/work/nilearn/nilearn/nilearn_data/spm_auditory
-    [fetch_spm_auditory] Data absent, downloading...
-    [fetch_single_file] Downloading data from https://www.fil.ion.ucl.ac.uk/spm/download/data/MoAEpilot/MoAEpilot.zip ...
-    [_chunk_read_]     Downloaded 4333568 of 34212021 bytes (12.7%,    7.1s remaining)
-    [_chunk_read_]     Downloaded 10264576 of 34212021 bytes (30.0%,    4.8s remaining)
-    [_chunk_read_]     Downloaded 15007744 of 34212021 bytes (43.9%,    3.9s remaining)
-    [_chunk_read_]     Downloaded 20078592 of 34212021 bytes (58.7%,    2.9s remaining)
-    [_chunk_read_]     Downloaded 25059328 of 34212021 bytes (73.2%,    1.9s remaining)
-    [_chunk_read_]     Downloaded 28917760 of 34212021 bytes (84.5%,    1.1s remaining)
-    [_chunk_read_]     Downloaded 33062912 of 34212021 bytes (96.6%,    0.2s remaining)
-    [fetch_single_file]  ...done. (8 seconds, 0 min)
-
-    [uncompress_file] Extracting data from /home/runner/work/nilearn/nilearn/nilearn_data/spm_auditory/sub001/MoAEpilot.zip...
-    [uncompress_file] .. done.
-
+    [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/spm_auditory
     /home/runner/work/nilearn/nilearn/nilearn_data/spm_auditory/sub001/fM00223/fM00223_004.img
     /home/runner/work/nilearn/nilearn/nilearn_data/spm_auditory/sub001/fM00223/fM00223_005.img
     /home/runner/work/nilearn/nilearn/nilearn_data/spm_auditory/sub001/fM00223/fM00223_006.img
@@ -144,7 +130,7 @@ We can display the first functional image and the subject's anatomy:
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38bb7635c0>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbbb1aa8a0>
 
 
 
@@ -1279,9 +1265,9 @@ Oops, there is a lot of non-neural signal in there (ventricles, arteries)...
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 26.059 seconds)
+   **Total running time of the script:** (0 minutes 15.151 seconds)
 
-**Estimated memory usage:**  283 MB
+**Estimated memory usage:**  280 MB
 
 
 .. _sphx_glr_download_auto_examples_00_tutorials_plot_single_subject_single_run.py:

diff --git a/dev/_sources/auto_examples/00_tutorials/sg_execution_times.rst.txt b/dev/_sources/auto_examples/00_tutorials/sg_execution_times.rst.txt
@@ -6,7 +6,7 @@
 
 Computation times
 =================
-**01:36.952** total execution time for 5 files **from auto_examples/00_tutorials**:
+**01:12.980** total execution time for 5 files **from auto_examples/00_tutorials**:
 
 .. container::
 
@@ -33,17 +33,17 @@ Computation times
      - Time
      - Mem (MB)
    * - :ref:`sphx_glr_auto_examples_00_tutorials_plot_decoding_tutorial.py` (``plot_decoding_tutorial.py``)
-     - 00:33.303
-     - 925.8
-   * - :ref:`sphx_glr_auto_examples_00_tutorials_plot_single_subject_single_run.py` (``plot_single_subject_single_run.py``)
-     - 00:26.059
-     - 282.6
+     - 00:33.694
+     - 958.2
    * - :ref:`sphx_glr_auto_examples_00_tutorials_plot_3d_and_4d_niimg.py` (``plot_3d_and_4d_niimg.py``)
-     - 00:22.740
-     - 213.4
+     - 00:18.012
+     - 213.6
+   * - :ref:`sphx_glr_auto_examples_00_tutorials_plot_single_subject_single_run.py` (``plot_single_subject_single_run.py``)
+     - 00:15.151
+     - 279.8
    * - :ref:`sphx_glr_auto_examples_00_tutorials_plot_nilearn_101.py` (``plot_nilearn_101.py``)
-     - 00:14.636
-     - 194.2
+     - 00:05.912
+     - 168.7
    * - :ref:`sphx_glr_auto_examples_00_tutorials_plot_python_101.py` (``plot_python_101.py``)
-     - 00:00.214
+     - 00:00.210
      - 10.4
diff --git a/dev/_sources/auto_examples/01_plotting/plot_3d_map_to_surface_projection.rst.txt b/dev/_sources/auto_examples/01_plotting/plot_3d_map_to_surface_projection.rst.txt
@@ -267,7 +267,7 @@ Plot 3D image for comparison
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.XSlicer object at 0x7f38ced7a240>
+    <nilearn.plotting.displays._slicers.XSlicer object at 0x7fbbba14c590>
 
 
 
@@ -380,14 +380,7 @@ in more memory usage and computation time, but finer visualizations.
 
  .. code-block:: none
 
-    [get_dataset_dir] Dataset created in /home/runner/work/nilearn/nilearn/nilearn_data/fsaverage
-    [fetch_single_file] Downloading data from https://osf.io/svf8k/download ...
-    [_chunk_read_]     Downloaded 26181632 of 34242788 bytes (76.5%,    0.3s remaining)
-    [fetch_single_file]  ...done. (3 seconds, 0 min)
-
-    [uncompress_file] Extracting data from /home/runner/work/nilearn/nilearn/nilearn_data/fsaverage/735bf0f211246c83396b5f21f706c224/download...
-    [uncompress_file] .. done.
-
+    [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/fsaverage
 
     <Figure size 470x500 with 2 Axes>
 
@@ -1165,13 +1158,7 @@ interpolation with zero radius will achieve this.
 
  .. code-block:: none
 
-    [get_dataset_dir] Dataset created in /home/runner/work/nilearn/nilearn/nilearn_data/destrieux_2009
-    [fetch_single_file] Downloading data from https://www.nitrc.org/frs/download.php/11942/destrieux2009.tgz ...
-    [fetch_single_file]  ...done. (0 seconds, 0 min)
-
-    [uncompress_file] Extracting data from /home/runner/work/nilearn/nilearn/nilearn_data/destrieux_2009/2a2e5a5707983d509d9319c692c867ab/destrieux2009.tgz...
-    [uncompress_file] .. done.
-
+    [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/destrieux_2009
     [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/fsaverage
 
 
@@ -1496,9 +1483,9 @@ interpolation with zero radius will achieve this.
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 23.448 seconds)
+   **Total running time of the script:** (0 minutes 19.805 seconds)
 
-**Estimated memory usage:**  307 MB
+**Estimated memory usage:**  339 MB
 
 
 .. _sphx_glr_download_auto_examples_01_plotting_plot_3d_map_to_surface_projection.py:

diff --git a/dev/_sources/auto_examples/01_plotting/plot_atlas.rst.txt b/dev/_sources/auto_examples/01_plotting/plot_atlas.rst.txt
@@ -52,20 +52,8 @@ Retrieving the atlas data
 
  .. code-block:: none
 
-    [get_dataset_dir] Dataset created in /home/runner/work/nilearn/nilearn/nilearn_data/fsl
-    [fetch_single_file] Downloading data from https://www.nitrc.org/frs/download.php/9902/HarvardOxford.tgz ...
-    [fetch_single_file]  ...done. (1 seconds, 0 min)
-
-    [uncompress_file] Extracting data from /home/runner/work/nilearn/nilearn/nilearn_data/fsl/c4d84bbdf5c3325f23e304cdea1e9706/HarvardOxford.tgz...
-    [uncompress_file] .. done.
-
     [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/fsl
-    [fetch_single_file] Downloading data from https://www.nitrc.org/frs/download.php/12096/Juelich.tgz ...
-    [fetch_single_file]  ...done. (0 seconds, 0 min)
-
-    [uncompress_file] Extracting data from /home/runner/work/nilearn/nilearn/nilearn_data/fsl/ab1b53038e13028e55f691a69003c208/Juelich.tgz...
-    [uncompress_file] .. done.
-
+    [get_dataset_dir] Dataset found in /home/runner/work/nilearn/nilearn/nilearn_data/fsl
     Atlas ROIs are located at: /home/runner/work/nilearn/nilearn/nilearn_data/fsl/data/atlases/HarvardOxford/HarvardOxford-cort-maxprob-thr25-2mm.nii.gz
     Atlas ROIs are located at: /home/runner/work/nilearn/nilearn/nilearn_data/fsl/data/atlases/Juelich/Juelich-maxprob-thr0-1mm.nii.gz
 
@@ -100,7 +88,7 @@ Visualizing the Harvard-Oxford atlas
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38af9cfc50>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbbb20c860>
 
 
 
@@ -130,7 +118,7 @@ Visualizing the Juelich atlas
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7f38b5d4a9c0>
+    <nilearn.plotting.displays._slicers.OrthoSlicer object at 0x7fbbbb3ca8a0>
 
 
 
@@ -198,9 +186,9 @@ Visualizing the Juelich atlas with contours
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (1 minutes 14.710 seconds)
+   **Total running time of the script:** (1 minutes 10.676 seconds)
 
-**Estimated memory usage:**  439 MB
+**Estimated memory usage:**  441 MB
 
 
 .. _sphx_glr_download_auto_examples_01_plotting_plot_atlas.py:

diff --git a/dev/_sources/auto_examples/01_plotting/plot_carpet.rst.txt b/dev/_sources/auto_examples/01_plotting/plot_carpet.rst.txt
@@ -216,9 +216,9 @@ Visualizing global patterns, separated by tissue type
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 6.140 seconds)
+   **Total running time of the script:** (0 minutes 6.046 seconds)
 
-**Estimated memory usage:**  957 MB
+**Estimated memory usage:**  987 MB
 
 
 .. _sphx_glr_download_auto_examples_01_plotting_plot_carpet.py:

diff --git a/dev/_sources/auto_examples/01_plotting/plot_colormaps.rst.txt b/dev/_sources/auto_examples/01_plotting/plot_colormaps.rst.txt
@@ -113,9 +113,9 @@ Plot matplotlib color maps
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 2.769 seconds)
+   **Total running time of the script:** (0 minutes 2.660 seconds)
 
-**Estimated memory usage:**  19 MB
+**Estimated memory usage:**  20 MB
 
 
 .. _sphx_glr_download_auto_examples_01_plotting_plot_colormaps.py:

diff --git a/dev/_sources/auto_examples/01_plotting/plot_demo_glass_brain.rst.txt b/dev/_sources/auto_examples/01_plotting/plot_demo_glass_brain.rst.txt
@@ -72,7 +72,7 @@ Glass brain plotting: whole brain sagittal cuts
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._projectors.OrthoProjector object at 0x7f38af9cc440>
+    <nilearn.plotting.displays._projectors.OrthoProjector object at 0x7fbbbfa11130>
 
 
 
@@ -109,7 +109,7 @@ the z view (option "display_mode").
  .. code-block:: none
 
 
-    <nilearn.plotting.displays._projectors.XZProjector object at 0x7f38b4249f70>
+    <nilearn.plotting.displays._projectors.XZProjector object at 0x7fbbbfa50aa0>
 
 
 
@@ -146,7 +146,7 @@ Glass brain plotting: Hemispheric sagittal cuts
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** (0 minutes 3.452 seconds)
+   **Total running time of the script:** (0 minutes 3.238 seconds)
 
 **Estimated memory usage:**  16 MB