CL release v2024-04-05 (#2326)

CL release v2024-04-05
obophenotype · Apr 8, 2024 · b72091d · b72091d
1 parent 1cbeb92
commit b72091d
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Showing 37 changed files with 92,967 additions and 151,281 deletions.
diff --git a/cl-base.owl b/cl-base.owl
diff --git a/cl.obo b/cl.obo
diff --git a/src/ontology/diffs/cl-diff.md b/src/ontology/diffs/cl-diff.md
diff --git a/src/ontology/reports/basic-report.tsv b/src/ontology/reports/basic-report.tsv
diff --git a/src/ontology/reports/cl-edit.owl-obo-report.tsv b/src/ontology/reports/cl-edit.owl-obo-report.tsv
@@ -142,8 +142,6 @@ WARN	missing_definition	CL:0001030	IAO:0000115
 WARN	missing_definition	CL:0001658	IAO:0000115	
 WARN	missing_definition	CL:0002551	IAO:0000115	
 WARN	missing_definition	CL:0002552	IAO:0000115	
-WARN	missing_definition	CL:0002579	IAO:0000115	
-WARN	missing_definition	CL:0002581	IAO:0000115	
 WARN	missing_definition	CL:0002598	IAO:0000115	
 WARN	missing_definition	CL:0002602	IAO:0000115	
 WARN	missing_definition	CL:0002621	IAO:0000115	
@@ -197,15 +195,11 @@ WARN	missing_definition	CL:1000615	IAO:0000115
 WARN	missing_definition	CL:1000616	IAO:0000115	
 WARN	missing_definition	CL:1000617	IAO:0000115	
 WARN	missing_definition	CL:1000618	IAO:0000115	
-WARN	missing_definition	CL:1000681	IAO:0000115	
-WARN	missing_definition	CL:1000682	IAO:0000115	
 WARN	missing_definition	CL:1000691	IAO:0000115	
-WARN	missing_definition	CL:1000692	IAO:0000115	
 WARN	missing_definition	CL:1000693	IAO:0000115	
 WARN	missing_definition	CL:1000695	IAO:0000115	
 WARN	missing_definition	CL:1000696	IAO:0000115	
 WARN	missing_definition	CL:1000697	IAO:0000115	
-WARN	missing_definition	CL:1000699	IAO:0000115	
 WARN	missing_definition	CL:1000702	IAO:0000115	
 WARN	missing_definition	CL:1000703	IAO:0000115	
 WARN	missing_definition	CL:1000706	IAO:0000115	
@@ -218,13 +212,10 @@ WARN	missing_definition	CL:1000720	IAO:0000115
 WARN	missing_definition	CL:1000721	IAO:0000115	
 WARN	missing_definition	CL:1000746	IAO:0000115	
 WARN	missing_definition	CL:1000768	IAO:0000115	
-WARN	missing_definition	CL:1000803	IAO:0000115	
-WARN	missing_definition	CL:1000804	IAO:0000115	
 WARN	missing_definition	CL:1000838	IAO:0000115	
 WARN	missing_definition	CL:1000839	IAO:0000115	
 WARN	missing_definition	CL:1000849	IAO:0000115	
 WARN	missing_definition	CL:1000850	IAO:0000115	
-WARN	missing_definition	CL:1000854	IAO:0000115	
 WARN	missing_definition	CL:1000891	IAO:0000115	
 WARN	missing_definition	CL:1000892	IAO:0000115	
 WARN	missing_definition	CL:1000893	IAO:0000115	
@@ -235,7 +226,6 @@ WARN	missing_definition	CL:1001006	IAO:0000115
 WARN	missing_definition	CL:1001009	IAO:0000115	
 WARN	missing_definition	CL:1001016	IAO:0000115	
 WARN	missing_definition	CL:1001021	IAO:0000115	
-WARN	missing_definition	CL:1001036	IAO:0000115	
 WARN	missing_definition	CL:1001045	IAO:0000115	
 WARN	missing_definition	CL:1001052	IAO:0000115	
 WARN	missing_definition	CL:1001064	IAO:0000115	
@@ -374,6 +364,7 @@ INFO	missing_superclass	CL:0000847	rdfs:subClassOf
 INFO	missing_superclass	CL:0000857	rdfs:subClassOf	
 INFO	missing_superclass	CL:0000858	rdfs:subClassOf	
 INFO	missing_superclass	CL:0000865	rdfs:subClassOf	
+INFO	missing_superclass	CL:0000880	rdfs:subClassOf	
 INFO	missing_superclass	CL:0000909	rdfs:subClassOf	
 INFO	missing_superclass	CL:0000937	rdfs:subClassOf	
 INFO	missing_superclass	CL:0000938	rdfs:subClassOf	
@@ -552,7 +543,6 @@ INFO	missing_superclass	CL:0010005	rdfs:subClassOf
 INFO	missing_superclass	CL:0010006	rdfs:subClassOf	
 INFO	missing_superclass	CL:0010007	rdfs:subClassOf	
 INFO	missing_superclass	CL:0010008	rdfs:subClassOf	
-INFO	missing_superclass	CL:0010009	rdfs:subClassOf	
 INFO	missing_superclass	CL:0010010	rdfs:subClassOf	
 INFO	missing_superclass	CL:0010011	rdfs:subClassOf	
 INFO	missing_superclass	CL:0010012	rdfs:subClassOf	

diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.json b/src/ontology/subsets/blood_and_immune_upper_slim.json
diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.obo b/src/ontology/subsets/blood_and_immune_upper_slim.obo
diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.owl b/src/ontology/subsets/blood_and_immune_upper_slim.owl
diff --git a/src/ontology/subsets/blood_and_immune_upper_slim.tsv b/src/ontology/subsets/blood_and_immune_upper_slim.tsv
diff --git a/src/ontology/subsets/eye_upper_slim.json b/src/ontology/subsets/eye_upper_slim.json