Skip to content
@oicr-gsi

Genome Sequence Informatics

Repositories for OICR's Genome Sequence Informatics team

Pinned Loading

  1. shesmu shesmu Public

    Decision-driven action launching system

    Java 8 4

  2. djerba djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    Python 9 4

  3. vidarr vidarr Public

    Analysis provenance tracking server

    Java 1 1

  4. data_release data_release Public

    Scripts for releasing data generated at OICR to stakeholders

    Python

Repositories

Showing 10 of 229 repositories
  • mrdetect Public

    workflow to detect Minimal Residual disease with MRDetect

    oicr-gsi/mrdetect’s past year of commit activity
    WDL 0 0 1 1 Updated Nov 6, 2024
  • biomodalQC Public

    QC workflow for biomodal pipeline

    oicr-gsi/biomodalQC’s past year of commit activity
    WDL 0 0 0 0 Updated Nov 5, 2024
  • djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    oicr-gsi/djerba’s past year of commit activity
    Python 9 GPL-3.0 4 4 6 Updated Nov 5, 2024
  • optitype Public

    Workflow for HLA genotyping prediction with optitype

    oicr-gsi/optitype’s past year of commit activity
    WDL 0 0 0 0 Updated Nov 5, 2024
  • dimsum Public

    QC Tracking dashboard

    oicr-gsi/dimsum’s past year of commit activity
    Java 1 GPL-3.0 0 0 2 Updated Nov 4, 2024
  • nabu Public

    QC tracking for files via a web service

    oicr-gsi/nabu’s past year of commit activity
    JavaScript 0 MIT 0 2 4 Updated Nov 4, 2024
  • shesmu Public

    Decision-driven action launching system

    oicr-gsi/shesmu’s past year of commit activity
    Java 8 MIT 4 0 1 Updated Nov 4, 2024
  • cardea Public

    Case data API

    oicr-gsi/cardea’s past year of commit activity
    Java 0 Apache-2.0 0 0 1 Updated Nov 4, 2024
  • callability Public
    oicr-gsi/callability’s past year of commit activity
    WDL 0 1 1 2 Updated Nov 1, 2024
  • smmipQC Public

    Set up manual smMip QC analyses

    oicr-gsi/smmipQC’s past year of commit activity
    Python 0 0 0 0 Updated Oct 30, 2024
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…