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Releases: openkinome/kinodata

Add ChEMBL 33

28 Jan 17:24
2169fdd
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  • Update to ChEMBL 33
  • Removal of kinase.com as a data source
  • Updated Uniprot API calls
  • Both non-curated and curated CSVs are provided as well as a sample of the first 100 data points for testing
  • EGFR kinase bioactivities based on the curated CSV as well as a sample of the first 100 data points for testing

Datapoints in each dataset:

Dataset Non-curated Curated Sample EGFR Kinase EGFR Sample
ChEMBL 27 217 612 174 238 - - -
ChEMBL 28 237 336 186 972 - - -
ChEMBL 29 242 609 190 634 100 6 509 100
ChEMBL 30 252 191 197 073 100 6 733 100
ChEMBL 33 272 922 211 607 100 7 287 100

Add CHEMBL 30

20 Apr 08:23
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  • Update to ChEMBL 30
  • Both non-curated and curated CSVs are provided as well as a sample of the first 100 data points for testing
  • EGFR kinase bioactivities based on the curated CSV as well as a sample of the first 100 data points for testing

Datapoints in each dataset:

Dataset Non-curated Curated Sample EGFR Kinase EGFR Sample
ChEMBL 27 217 612 174 238 - - -
ChEMBL 28 237 336 186 972 - - -
ChEMBL 29 242 609 190 634 100 6 509 100
ChEMBL 30 252 191 197 073 100 6 733 100

Add CHEMBL 29

26 Aug 15:32
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  • Update to ChEMBL 29
  • Both non-curated and curated CSVs are provided as well as a sample of the first 100 data points for testing
  • EGFR kinase bioactivities based on the curated CSV as well as a sample of the first 100 data points for testing

Datapoints in each dataset:

Dataset Non-curated Curated Sample EGFR Kinase EGFR Sample
ChEMBL 27 217 612 174 238 - - -
ChEMBL 28 237 336 186 972 - - -
ChEMBL 29 242 609 190 634 100 6 509 100

Add ChEMBL 28 and curation pipeline

07 Apr 18:04
6729d53
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  • Fixed UniProt queries for the human kinome
  • Add support for ChEMBL 28
  • Add curation pipeline. Both non-curated and curated CSVs are provided

Datapoints in each dataset:

Dataset Non-curated Curated
ChEMBL 27 182 223 148 836
ChEMBL 28 199 238 159 978

The *sample100* file is a subset of 100 datapoints for testing purposes.

Initial release

12 Jun 13:58
539399e
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I will start cutting releases for datascripts so we can easily guarantee data provenance in other projects.

This adds data for ChEMBL27, hereby attached.