FIX: make proposal for sdml formulation

MAINT clearer formulation to make the prior appear

MAINT call the prior prior

Use skggm instead of graphical lasso

Be more severe for the class separation

Merge branch 'master' into fix/proposal_for_sdml …

# Conflicts:
#	metric_learn/sdml.py

Put back verbose param

MAINT: make more explicit the fact that to use identity (i.e. an SPD … …

…matrix) as initialization

Add skggm as a requirement for SDML

Add skggm to required packages for travis

Also add cython as a dependency

FIX: install all except skggm and then skggm

Remove cython dependency

Install skggm only if we have at least python 3.6

Should work if we want other versions superior to 3.6

Fix bash >= which should be written -ge

Deal with tests when skggm is not installed and fix some PEP8 warnings

replace manual calls of algorithms with tuples_learners

Remove another call of SDML if skggm is not installed

FIX fix the test_error_message_tuple_size

FIX fix test_sdml_supervised

FIX: fix another sdml test

FIX quic call for python 2.7

Fix quic import

Add Sigma0 initalization (both sigma zero and theta zero should be sp… …

…ecified otherwise an error is returned

Deal with SDML making some tests fail

Remove epsilon that was unnecessary

FIX: use latest commit of skggm that fixes the non deterministic problem

MAINT: add message for SDML when not SPD

MAINT: add test for error message if skggm not installed

Try other syntax for installing the right commit of skggm

MAINT: make sklearn compat sdml test be run only if skggm is installed

Try another syntax for running travis

Better bash syntax

Fix tests by removing duplicates

FIX: fix for sdml by reducing balance parameter

FIX: update code to work with old version of numpy that does not have… …

… axis for unique

Remove the need for skggm

Update travis not to use skggm

Add a stable init for sklearn checks

FIX test_sdml_supervised

Revert "Update travis not to use skggm" …

This reverts commit 57b0567.

Add fallback on skggm

FIX: fix versions comparison and tests

MAINT: improve test of no warning

FIX: fix wrap pairs that was returning column y (we need line y), and… …

… fix the example for SDML to not raise another warning

FIX: force travis to do the right check

TST: add non SPD test that works with skggm's quic but not sklearn's … …

…graphical_lasso

Try again travis this time installing cython

Try to make travis work with build_essential

Try with installing liblapack

TST: fix tests for when skggm is not installed

TST: use better pytest skipif syntax

FIX: fix broken link in README.md

use rst syntax for link

use rst syntax for link

use rst syntax for link

MAINT: remove test_sdml that was remaining from drafts tests

TST: remove skipping SDML in test_cross_validation_manual_vs_scikit

FIX link also in getting started

Put back right indent

Remove unnecessary changes

merging

Nitpick for concatenation and refactor HAS_SKGGM

ENH: Deal better with errors and skggm/scikit-learn

Better creation of prior

Simplification for init of sdml

Put skggm as optional

Specify skggm version

TST: make test about 1 feature arrays more readable

DOC: fix rst formatting

DOC: reformulated skggm optional dependency

TST: give an example for sdml_supervised with skggm where it indeed f… …

…ails

TST: fix test that fails weirdly when executing the whole test file a… …

…nd not just the test

Revert "TST: fix test that fails weirdly when executing the whole tes… …

…t file and not just the test"

This reverts commit 6f5666b.

Merge branch 'master' into fix/proposal_for_sdml

wdevazelhes authored Mar 21, 2019

Add coverage for all versions of python

Install pytest-cov for all versions