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fix typos hindering expandable profile db to be merged properly (#840)
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endixk authored May 2, 2024
1 parent d4841a8 commit 998c50a
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions data/workflow/tsv2exprofiledb.sh
Original file line number Diff line number Diff line change
Expand Up @@ -22,19 +22,19 @@ fi

if notExists "${OUT}.dbtype"; then
"$MMSEQS" tsv2db "${IN}.tsv" "${OUT}_tmp" --output-dbtype 0 ${VERBOSITY}
MMSEQS_FOCE_MERGE=1 "$MMSEQS" compress "${OUT}_tmp" "${OUT}" ${VERBOSITY}
MMSEQS_FORCE_MERGE=1 "$MMSEQS" compress "${OUT}_tmp" "${OUT}" ${VERBOSITY}
"$MMSEQS" rmdb "${OUT}_tmp" ${VERBOSITY}
fi

if notExists "${OUT}_seq.dbtype"; then
"$MMSEQS" tsv2db "${IN}_seq.tsv" "${OUT}_seq_tmp" --output-dbtype 0 ${VERBOSITY}
MMSEQS_FOCE_MERGE=1 "$MMSEQS" compress "${OUT}_seq_tmp" "${OUT}_seq" ${VERBOSITY}
MMSEQS_FORCE_MERGE=1 "$MMSEQS" compress "${OUT}_seq_tmp" "${OUT}_seq" ${VERBOSITY}
"$MMSEQS" rmdb "${OUT}_seq_tmp" ${VERBOSITY}
fi

if notExists "${OUT}_aln.dbtype"; then
"$MMSEQS" tsv2db "${IN}_aln.tsv" "${OUT}_aln_tmp" --output-dbtype 5 ${VERBOSITY}
MMSEQS_FOCE_MERGE=1 "$MMSEQS" compress "${OUT}_aln_tmp" "${OUT}_aln" ${VERBOSITY}
MMSEQS_FORCE_MERGE=1 "$MMSEQS" compress "${OUT}_aln_tmp" "${OUT}_aln" ${VERBOSITY}
"$MMSEQS" rmdb "${OUT}_aln_tmp" ${VERBOSITY}
fi

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