Only fetch cSeqId if its needed in expand

soedinglab · Mar 7, 2024 · f6c9880 · f6c9880
1 parent cb714dd
commit f6c9880
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/util/expandaln.cpp b/src/util/expandaln.cpp
@@ -321,8 +321,8 @@ int expandaln(int argc, const char **argv, const Command& command, bool returnAl
                             continue;
                         }
                     } else {
-                        size_t cSeqId = cReader->getId(cSeqKey);
                         if (returnAlnRes == false || par.expansionMode == Parameters::EXPAND_RESCORE_BACKTRACE) {
+                            size_t cSeqId = cReader->getId(cSeqKey);
                             cSeq.mapSequence(cSeqId, cSeqKey, cReader->getData(cSeqId, thread_idx), cReader->getSeqLen(cSeqId));
                         }
                         //rescoreResultByBacktrace(resultAc, aSeq, cSeq, subMat, compositionBias, par.gapOpen.values.aminoacid(), par.gapExtend.values.aminoacid());