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Process GPML changes
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actions-user committed Jul 31, 2023
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42 changes: 21 additions & 21 deletions pathways/WP5153/WP5153.gpml
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<?xml version="1.0" encoding="UTF-8"?>
<Pathway xmlns="http://pathvisio.org/GPML/2013a" Name="N-glycan biosynthesis" Data-Source="WikiPathways" Version="WP5153_r126751" Author="[Khanspers, Egonw]" Last-Modified="20230618132529" Organism="Homo sapiens">
<Pathway xmlns="http://pathvisio.org/GPML/2013a" Name="N-glycan biosynthesis" Data-Source="WikiPathways" Version="WP5153_r127082" Author="[Khanspers, Egonw]" Last-Modified="20230730110652" Organism="Homo sapiens">
<Comment Source="WikiPathways-description">This pathways describes the biosynthesis of N-linked (Asparagine-linked) glycans, to form glycoproteins. This process is a type of co-translational and post-translational modification and sometimes referred to as N-linked glycosylation. Glycosylation is important for many processes, including protein folding and cell-cell adhesion and immune function.
This pathway was modeled based on figure 9.3 and 9.4 from [https://www.ncbi.nlm.nih.gov/books/NBK453020/ Essentials of Glycobiology [Internet]. 3rd edition], figure 17.1 from [https://link.springer.com/chapter/10.1007/978-981-13-2835-0_17 Dall'Olio] and [https://www.genome.jp/pathway/hsa00510 KEGG].</Comment>
This pathway was modeled based on Figure 9.3 and 9.4 from [https://www.ncbi.nlm.nih.gov/books/NBK453020/ Essentials of Glycobiology [Internet]. 3rd edition], Figure 17.1 from [https://link.springer.com/chapter/10.1007/978-981-13-2835-0_17 Dall'Olio] and [https://www.genome.jp/pathway/hsa00510 KEGG].</Comment>
<BiopaxRef>b72</BiopaxRef>
<BiopaxRef>db6</BiopaxRef>
<BiopaxRef>f34</BiopaxRef>
Expand Down Expand Up @@ -1108,9 +1108,17 @@ This pathway was modeled based on figure 9.3 and 9.4 from [https://www.ncbi.nlm.
<Group GroupId="b7a08" GraphId="f9f60" Style="Group" />
<InfoBox CenterX="0.0" CenterY="0.0" />
<Biopax>
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="f34">
<bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">30779020</bp:ID>
<bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
<bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Glycobiology of Aging.</bp:TITLE>
<bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Subcell Biochem</bp:SOURCE>
<bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2018</bp:YEAR>
<bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Dall'Olio F</bp:AUTHORS>
</bp:PublicationXref>
<bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#">
<bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">N-linked glycan biosynthetic pathway</bp:TERM>
<bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PW:0000192</bp:ID>
<bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">protein modification pathway</bp:TERM>
<bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PW:0000432</bp:ID>
<bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathway Ontology</bp:Ontology>
</bp:openControlledVocabulary>
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="a42">
Expand All @@ -1134,25 +1142,10 @@ This pathway was modeled based on figure 9.3 and 9.4 from [https://www.ncbi.nlm.
<bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Marquardt T</bp:AUTHORS>
</bp:PublicationXref>
<bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#">
<bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">protein modification pathway</bp:TERM>
<bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PW:0000432</bp:ID>
<bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">N-linked glycan biosynthetic pathway</bp:TERM>
<bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PW:0000192</bp:ID>
<bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathway Ontology</bp:Ontology>
</bp:openControlledVocabulary>
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="db6">
<bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string"></bp:ID>
<bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
<bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">N-Glycan biosynthesis - Homo sapiens (human)</bp:TITLE>
<bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://www.kegg.jp/entry/pathway+hsa00510</bp:SOURCE>
<bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string"></bp:YEAR>
</bp:PublicationXref>
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="f34">
<bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">30779020</bp:ID>
<bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
<bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Glycobiology of Aging.</bp:TITLE>
<bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Subcell Biochem</bp:SOURCE>
<bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string">2018</bp:YEAR>
<bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Dall'Olio F</bp:AUTHORS>
</bp:PublicationXref>
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="b72">
<bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string">28876855</bp:ID>
<bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
Expand All @@ -1164,6 +1157,13 @@ This pathway was modeled based on figure 9.3 and 9.4 from [https://www.ncbi.nlm.
<bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Esko JD, et al.</bp:AUTHORS>
<bp:AUTHORS rdf:datatype="http://www.w3.org/2001/XMLSchema#string">editors</bp:AUTHORS>
</bp:PublicationXref>
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="db6">
<bp:ID rdf:datatype="http://www.w3.org/2001/XMLSchema#string"></bp:ID>
<bp:DB rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PubMed</bp:DB>
<bp:TITLE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">N-Glycan biosynthesis - Homo sapiens (human)</bp:TITLE>
<bp:SOURCE rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://www.kegg.jp/entry/pathway+hsa00510</bp:SOURCE>
<bp:YEAR rdf:datatype="http://www.w3.org/2001/XMLSchema#string"></bp:YEAR>
</bp:PublicationXref>
</Biopax>
</Pathway>

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