Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

update preseq/lcextrap errorStrategy to ignore #7011

Open
wants to merge 2 commits into
base: master
Choose a base branch
from

Conversation

sateeshperi
Copy link
Contributor

No description provided.

@sateeshperi sateeshperi changed the title update errorStrategy to ignore update preseq/lcextrap errorStrategy to ignore Nov 18, 2024
@edmundmiller
Copy link
Contributor

@sateeshperi what about #5091 ?

@@ -1,7 +1,7 @@
process PRESEQ_LCEXTRAP {
tag "$meta.id"
label 'process_single'
label 'error_retry'
label 'error_ignore'
Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Can we remove the label and make a custom one?

Retry it once, then if it fails the second time we ignore it?

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

label 'error_retry_ignore' ?

Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

No just define the error strategy at that point 😂

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants