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35 Open 130 Closed
35 Open 130 Closed
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Issues list

add tests for validating json records against nmdc-schema testing
#261 opened Oct 1, 2024 by aclum
import automation logic when import files don't have upstream records. import
#260 opened Oct 1, 2024 by aclum
import automation generating mongo keys for which values are None or an empty list import
#259 opened Oct 1, 2024 by aclum
1
Configure and Deploy Berkley RC1
#256 opened Oct 1, 2024 by mbthornton-lbl
3 tasks
@mbthornton-lbl
ReadsQC Output Update (v1.0.12)
#255 opened Sep 30, 2024 by vlilanl
1 task
1
@aclum
1
Update nmdc_automation.import_automation to be compatible with Berkley metadata and endpoints
#254 opened Sep 27, 2024 by mbthornton-lbl
1
@aclum @mbthornton-lbl
1
Workflow Automation Deploy Berkley RC1
#252 opened Sep 24, 2024 by mbthornton-lbl
2 of 3 tasks
@mbthornton-lbl
Missing keys in activity records
#251 opened Sep 17, 2024 by aclum
@mbthornton-lbl
1
annotation update for JGI annotation 5.3
#249 opened Sep 16, 2024 by aclum
ReadsQC - updated logic to take in more than one file (v1.0.11)
#241 opened Aug 23, 2024 by vlilanl
2 tasks
1
@aclum
3
update import logic to update OmicsProcessing record import
#239 opened Aug 20, 2024 by aclum
@scanon @mbthornton-lbl
update author list of pyproject.toml
#238 opened Aug 20, 2024 by aclum
add code to generate input.jsons for steps defined in workflows-mt.yaml backlog
#230 opened Aug 6, 2024 by aclum
@mbthornton-lbl
4
Create test instance of each workflow that leaverage Berkeley schema & new runtime backlog
#220 opened Jul 24, 2024 by mbthornton-lbl
10 tasks
@mbthornton-lbl
2
Add some tracing logic to help debug things enhancement New feature or request
#207 opened Jul 2, 2024 by scanon
MG Annotation v1.1.1
#205 opened Jul 1, 2024 by kaijli
ReadbasedAnalysis Version 1.0 (v1.0.7)
#202 opened Jun 25, 2024 by vlilanl
1 task
@scanon
1
Add md5sum checks for data copied to results folder
#192 opened Jun 13, 2024 by aclum
@mbthornton-lbl
1
Implement JAWS API wrapper
#190 opened Jun 12, 2024 by mbthornton-lbl
@mbthornton-lbl
metaAssembly output update (v1.0.5)
#189 opened Jun 11, 2024 by vlilanl
3 tasks
@scanon @mbthornton-lbl
1
Data QC: workflow_execution_has_input_data_objects
#176 opened May 16, 2024 by mbthornton-lbl
2
Document the scheduler script documentation Improvements or additions to documentation
#146 opened May 2, 2024 by eecavanna
Update README and code documentation for JGI file staging
#84 opened Apr 9, 2024 by mbthornton-lbl
@mbthornton-lbl
automation support for long read assembly
#82 opened Mar 29, 2024 by aclum
@scanon @kaijli @vlilanl
Fix error in jgi_file_metadata.py
#76 opened Mar 20, 2024 by mbthornton-lbl
@mbthornton-lbl
1
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